Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM1P09493 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.08□□□□□ -1.28
TPM1P09493 RPL14P5-201ENST00000436474 730 ntBASIC7.08□□□□□ -1.28
TPM1P09493 GAPDHP20-201ENST00000444107 1007 ntBASIC7.08□□□□□ -1.28
TPM1P09493 AC005517.1-201ENST00000452091 489 ntBASIC7.08□□□□□ -1.28
TPM1P09493 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TPM1P09493 AC022206.1-201ENST00000495947 347 ntBASIC7.08□□□□□ -1.28
TPM1P09493 AC139713.1-202ENST00000512366 460 ntBASIC7.08□□□□□ -1.28
TPM1P09493 OR52H2P-201ENST00000514607 902 ntBASIC7.08□□□□□ -1.28
TPM1P09493 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM1P09493 AC008429.2-201ENST00000523057 864 ntBASIC7.08□□□□□ -1.28
TPM1P09493 PDCL3P1-201ENST00000534575 734 ntBASIC7.08□□□□□ -1.28
TPM1P09493 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM1P09493 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
TPM1P09493 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM1P09493 MIR378C-201ENST00000578683 81 ntBASIC7.08□□□□□ -1.28
TPM1P09493 MIR4428-201ENST00000584884 73 ntBASIC7.08□□□□□ -1.28
TPM1P09493 AC024255.1-201ENST00000614376 102 ntBASIC7.08□□□□□ -1.28
TPM1P09493 KDM5DP1-201ENST00000622542 298 ntBASIC7.08□□□□□ -1.28
TPM1P09493 AC006328.2-201ENST00000623198 397 ntBASIC7.08□□□□□ -1.28
TPM1P09493 AC005753.1-201ENST00000623837 618 ntBASIC7.08□□□□□ -1.28
TPM1P09493 AC012005.2-201ENST00000624333 397 ntBASIC7.08□□□□□ -1.28
TPM1P09493 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
TPM1P09493 AL592429.1-201ENST00000403909 1473 ntBASIC7.08□□□□□ -1.28
TPM1P09493 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
TPM1P09493 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TPM1P09493 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.08□□□□□ -1.28
TPM1P09493 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.08□□□□□ -1.28
TPM1P09493 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
TPM1P09493 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TPM1P09493 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
TPM1P09493 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM1P09493 AL121839.2-201ENST00000565058 6943 ntBASIC7.07□□□□□ -1.28
TPM1P09493 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TPM1P09493 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TPM1P09493 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.07□□□□□ -1.28
TPM1P09493 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TPM1P09493 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
TPM1P09493 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM1P09493 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TPM1P09493 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM1P09493 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM1P09493 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
TPM1P09493 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
TPM1P09493 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TPM1P09493 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TPM1P09493 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TPM1P09493 GNG5P2-201ENST00000372054 207 ntBASIC7.07□□□□□ -1.28
TPM1P09493 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.07□□□□□ -1.28
TPM1P09493 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.07□□□□□ -1.28
TPM1P09493 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.07□□□□□ -1.28
TPM1P09493 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TPM1P09493 RPLP1P10-201ENST00000413972 339 ntBASIC7.07□□□□□ -1.28
TPM1P09493 UBE2V1P14-201ENST00000415815 558 ntBASIC7.07□□□□□ -1.28
TPM1P09493 RPL6P21-201ENST00000418672 846 ntBASIC7.07□□□□□ -1.28
TPM1P09493 AL590399.4-201ENST00000436561 601 ntBASIC7.07□□□□□ -1.28
TPM1P09493 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC7.07□□□□□ -1.28
TPM1P09493 AC079922.1-201ENST00000443291 359 ntBASIC7.07□□□□□ -1.28
TPM1P09493 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.07□□□□□ -1.28
TPM1P09493 AC126615.1-201ENST00000470084 630 ntBASIC7.07□□□□□ -1.28
TPM1P09493 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.07□□□□□ -1.28
TPM1P09493 AP005902.2-201ENST00000518393 307 ntBASIC7.07□□□□□ -1.28
TPM1P09493 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.07□□□□□ -1.28
TPM1P09493 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.07□□□□□ -1.28
TPM1P09493 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.07□□□□□ -1.28
TPM1P09493 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
TPM1P09493 RN7SL208P-201ENST00000577964 296 ntBASIC7.07□□□□□ -1.28
TPM1P09493 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.07□□□□□ -1.28
TPM1P09493 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TPM1P09493 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TPM1P09493 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
TPM1P09493 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
TPM1P09493 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.07□□□□□ -1.28
TPM1P09493 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM1P09493 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TPM1P09493 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TPM1P09493 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM1P09493 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TPM1P09493 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
TPM1P09493 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
TPM1P09493 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TPM1P09493 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
TPM1P09493 ZNF969P-201ENST00000510345 2341 ntBASIC7.06□□□□□ -1.28
TPM1P09493 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TPM1P09493 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TPM1P09493 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM1P09493 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TPM1P09493 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TPM1P09493 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.06□□□□□ -1.28
TPM1P09493 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.06□□□□□ -1.28
TPM1P09493 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.06□□□□□ -1.28
TPM1P09493 snoU13.29-201ENST00000459370 104 ntBASIC7.06□□□□□ -1.28
TPM1P09493 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.06□□□□□ -1.28
TPM1P09493 AL355032.1-201ENST00000472981 438 ntBASIC7.06□□□□□ -1.28
TPM1P09493 AC131392.1-201ENST00000506490 633 ntBASIC7.06□□□□□ -1.28
TPM1P09493 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TPM1P09493 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.06□□□□□ -1.28
TPM1P09493 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.06□□□□□ -1.28
TPM1P09493 AC106800.3-201ENST00000511389 308 ntBASIC7.06□□□□□ -1.28
TPM1P09493 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms