Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
APPP05067 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
APPP05067 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC8.13□□□□□ -1.11
APPP05067 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.13□□□□□ -1.11
APPP05067 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
APPP05067 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.13□□□□□ -1.11
APPP05067 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
APPP05067 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
APPP05067 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC8.13□□□□□ -1.11
APPP05067 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
APPP05067 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC8.13□□□□□ -1.11
APPP05067 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
APPP05067 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
APPP05067 NCOA4P2-201ENST00000340589 1813 ntBASIC8.13□□□□□ -1.11
APPP05067 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
APPP05067 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
APPP05067 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
APPP05067 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
APPP05067 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
APPP05067 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
APPP05067 RNA5SP65-201ENST00000363166 119 ntBASIC8.12□□□□□ -1.11
APPP05067 RNA5SP474-201ENST00000391234 90 ntBASIC8.12□□□□□ -1.11
APPP05067 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.12□□□□□ -1.11
APPP05067 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
APPP05067 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.12□□□□□ -1.11
APPP05067 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC8.12□□□□□ -1.11
APPP05067 PTPN2P1-201ENST00000423212 1072 ntBASIC8.12□□□□□ -1.11
APPP05067 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.12□□□□□ -1.11
APPP05067 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.12□□□□□ -1.11
APPP05067 AHCYP8-201ENST00000425108 209 ntBASIC8.12□□□□□ -1.11
APPP05067 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.12□□□□□ -1.11
APPP05067 PSMD8P1-201ENST00000436275 769 ntBASIC8.12□□□□□ -1.11
APPP05067 AC002486.2-201ENST00000447806 590 ntBASIC8.12□□□□□ -1.11
APPP05067 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.12□□□□□ -1.11
APPP05067 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
APPP05067 RN7SL37P-201ENST00000490461 307 ntBASIC8.12□□□□□ -1.11
APPP05067 RPL23AP80-201ENST00000495605 424 ntBASIC8.12□□□□□ -1.11
APPP05067 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.12□□□□□ -1.11
APPP05067 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
APPP05067 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC8.12□□□□□ -1.11
APPP05067 RNA5SP318-201ENST00000516352 92 ntBASIC8.12□□□□□ -1.11
APPP05067 SNORA26.10-201ENST00000516427 141 ntBASIC8.12□□□□□ -1.11
APPP05067 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC8.12□□□□□ -1.11
APPP05067 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.12□□□□□ -1.11
APPP05067 CHEK2P2-201ENST00000554701 672 ntBASIC8.12□□□□□ -1.11
APPP05067 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC8.12□□□□□ -1.11
APPP05067 AL158211.1-201ENST00000566763 763 ntBASIC8.12□□□□□ -1.11
APPP05067 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC8.12□□□□□ -1.11
APPP05067 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.12□□□□□ -1.11
APPP05067 AP003117.1-201ENST00000602771 554 ntBASIC8.12□□□□□ -1.11
APPP05067 AC117490.2-201ENST00000610042 594 ntBASIC8.12□□□□□ -1.11
APPP05067 RAB28P4-201ENST00000622233 665 ntBASIC8.12□□□□□ -1.11
APPP05067 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
APPP05067 AL596244.1-201ENST00000567068 3779 ntBASIC8.12□□□□□ -1.11
APPP05067 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.12□□□□□ -1.11
APPP05067 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
APPP05067 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
APPP05067 SNX18P3-202ENST00000565670 1750 ntBASIC8.12□□□□□ -1.11
APPP05067 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
APPP05067 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.12□□□□□ -1.11
APPP05067 AC018628.1-201ENST00000624147 3819 ntBASIC8.12□□□□□ -1.11
APPP05067 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.11□□□□□ -1.11
APPP05067 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.11□□□□□ -1.11
APPP05067 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.11□□□□□ -1.11
APPP05067 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
APPP05067 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.11□□□□□ -1.11
APPP05067 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
APPP05067 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
APPP05067 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
APPP05067 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
APPP05067 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC8.11□□□□□ -1.11
APPP05067 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
APPP05067 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
APPP05067 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
APPP05067 AC073310.1-201ENST00000423226 1033 ntBASIC8.11□□□□□ -1.11
APPP05067 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.11□□□□□ -1.11
APPP05067 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC8.11□□□□□ -1.11
APPP05067 AP003385.1-201ENST00000426387 893 ntBASIC8.11□□□□□ -1.11
APPP05067 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC8.11□□□□□ -1.11
APPP05067 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8.11□□□□□ -1.11
APPP05067 PFN1P11-201ENST00000445829 389 ntBASIC8.11□□□□□ -1.11
APPP05067 RN7SL834P-201ENST00000461450 286 ntBASIC8.11□□□□□ -1.11
APPP05067 PGBD4P1-201ENST00000473644 407 ntBASIC8.11□□□□□ -1.11
APPP05067 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
APPP05067 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.11□□□□□ -1.11
APPP05067 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.11□□□□□ -1.11
APPP05067 AC095057.1-201ENST00000507583 168 ntBASIC8.11□□□□□ -1.11
APPP05067 NREP-217ENST00000509025 987 ntTSL 3 BASIC8.11□□□□□ -1.11
APPP05067 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.11□□□□□ -1.11
APPP05067 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.11□□□□□ -1.11
APPP05067 NREP-223ENST00000515855 801 ntTSL 4 BASIC8.11□□□□□ -1.11
APPP05067 AC113191.1-201ENST00000517759 403 ntBASIC8.11□□□□□ -1.11
APPP05067 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC8.11□□□□□ -1.11
APPP05067 SNRPCP6-201ENST00000528310 210 ntBASIC8.11□□□□□ -1.11
APPP05067 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC8.11□□□□□ -1.11
APPP05067 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC8.11□□□□□ -1.11
APPP05067 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC8.11□□□□□ -1.11
APPP05067 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC8.11□□□□□ -1.11
APPP05067 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.11□□□□□ -1.11
APPP05067 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms