Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 MTND2P40-201ENST00000436718 841 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 Z77249.1-201ENST00000444622 1175 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AL445991.1-201ENST00000450381 475 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 MTATP6P14-201ENST00000455189 673 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC083806.1-201ENST00000468934 316 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AP003385.3-201ENST00000472498 287 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 PGBD4P1-201ENST00000473644 407 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 RN7SL612P-201ENST00000497704 295 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 TRAV31-201ENST00000502780 342 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC010442.1-201ENST00000515583 816 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AP006587.5-201ENST00000532033 739 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 SETP17-201ENST00000534163 817 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC016144.1-201ENST00000548175 1087 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC036176.3-201ENST00000602456 418 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AL445435.1-201ENST00000604232 665 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC091768.1-201ENST00000609258 930 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 MIR7854-201ENST00000620068 65 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC004943.3-201ENST00000624116 600 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC004808.2-201ENST00000627965 773 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC087269.2-201ENST00000641764 975 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 ZNF806-201ENST00000438300 1774 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC092725.2-201ENST00000567658 1389 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 SNORD94-201ENST00000386037 137 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 ARSFP1-201ENST00000398758 477 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AL353133.1-201ENST00000407695 401 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 GABARAPL3-201ENST00000412799 354 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 HMGN1P32-201ENST00000441744 256 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC073476.1-201ENST00000452854 407 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 MTND2P6-201ENST00000455337 1030 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 LDHBP2-201ENST00000456969 1005 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 MTCO2P6-201ENST00000463134 685 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 RN7SL382P-201ENST00000482631 282 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC009567.2-201ENST00000502989 349 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 SNRPCP6-201ENST00000528310 210 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 ZNF971P-201ENST00000562068 1249 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 RN7SL270P-201ENST00000579643 281 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AP005136.2-201ENST00000583253 1049 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC084824.5-201ENST00000612009 413 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 AC025287.2-201ENST00000621911 668 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 MKI67P1-201ENST00000604297 1460 ntBASIC7.11□□□□□ -1.27
CDK5RAP1Q96SZ6 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms