Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 MIR4258-201ENST00000580920 91 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC073263.3-201ENST00000624449 858 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC004014.2-201ENST00000623718 5122 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AL512329.1-201ENST00000404600 1592 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 CYCSP17-201ENST00000407870 315 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 TMA16P2-201ENST00000413187 601 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC007365.2-201ENST00000428806 458 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 RNU7-157P-201ENST00000459600 66 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC091917.2-201ENST00000505002 744 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC026774.2-201ENST00000513990 1098 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AP001646.2-201ENST00000528645 1156 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AL132640.2-202ENST00000559732 614 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC026458.1-201ENST00000564330 438 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 RN7SL697P-201ENST00000582484 299 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 MIR4786-201ENST00000583954 80 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC007255.2-201ENST00000604053 631 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC104117.5-201ENST00000606195 547 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC139792.1-201ENST00000607051 647 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 AP005212.4-201ENST00000614206 710 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC008626.2-201ENST00000624425 248 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 AL355480.4-201ENST00000626823 69 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AL592429.1-201ENST00000403909 1473 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AL049869.1-201ENST00000556933 1402 ntBASIC5.82□□□□□ -1.48
RFT1Q96AA3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RFT1Q96AA3 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFT1Q96AA3 AC010401.2-201ENST00000575137 4934 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 AC102941.1-201ENST00000567616 1537 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 Y_RNA.209-201ENST00000364156 111 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 RNU1-59P-201ENST00000364829 162 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 RNA5SP442-201ENST00000365050 107 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 RNA5SP280-201ENST00000411230 115 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 CLIC4P3-201ENST00000422221 752 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 GAPDHP69-201ENST00000425504 1008 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 MEF2AP1-201ENST00000454867 863 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 SCDP1-201ENST00000455244 1081 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms