Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 RN7SL329P-201ENST00000467740 299 ntBASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 Y_RNA.710-201ENST00000516975 110 ntBASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 IGHV3-57-201ENST00000520143 280 ntBASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 AC005244.1-201ENST00000582566 339 ntBASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 AC037198.3-201ENST00000616754 526 ntBASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC8.37□□□□□ -1.07
COL22A1Q8NFW1 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 AP000534.2-201ENST00000412729 568 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 DUTP7-201ENST00000507982 486 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 IGKV1D-22-201ENST00000518953 324 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 AL008723.3-201ENST00000608926 449 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 CASC19-228ENST00000641414 1684 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 FMO7P-201ENST00000436045 768 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 AC007386.1-201ENST00000455212 582 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 RANP2-201ENST00000456833 229 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 NDUFA5P12-201ENST00000503796 343 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 MIR1269B-201ENST00000580405 75 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 AC012254.3-201ENST00000591183 2117 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 AC012653.2-201ENST00000621880 420 ntBASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.36□□□□□ -1.07
COL22A1Q8NFW1 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 AC011416.1-201ENST00000514947 1732 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 RN7SKP124-201ENST00000364730 341 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 RNU1-46P-201ENST00000384425 164 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 AL023284.3-201ENST00000407767 334 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 RPS27P18-201ENST00000431701 247 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 EIF4A2P5-201ENST00000529914 499 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 MIR4776-2-201ENST00000580204 80 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 AL953862.2-201ENST00000603089 820 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 AL645933.2-201ENST00000606743 1207 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 RN7SL544P-201ENST00000617232 284 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 RN7SL763P-201ENST00000620922 284 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 CU639417.4-201ENST00000623928 207 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 SAMMSON-227ENST00000642114 1199 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 AC092111.1-201ENST00000618256 3358 ntBASIC8.35□□□□□ -1.07
COL22A1Q8NFW1 AC015871.3-201ENST00000618835 2261 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms