Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 SPATA31C2-201ENST00000324915 3777 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 ANKRD36P1-201ENST00000344424 659 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 RNU6-224P-201ENST00000384055 107 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 Y_RNA.436-201ENST00000384097 102 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 KRT18P52-201ENST00000404956 846 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 RPL26P37-201ENST00000411983 438 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AL031779.1-201ENST00000415663 330 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 MTND1P20-201ENST00000430341 950 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 USP9YP14-201ENST00000430663 563 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 HBBP1-201ENST00000433329 439 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AL590682.1-201ENST00000437248 344 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 PTGES3P1-201ENST00000439531 483 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AL137074.1-201ENST00000442640 465 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 RPL21P33-201ENST00000444831 484 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 PTENP1-201ENST00000447117 1215 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 ATP5G1P6-201ENST00000451206 412 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC087385.2-201ENST00000477729 498 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC127024.1-201ENST00000490847 418 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC008629.3-201ENST00000505786 586 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 RNU6-1334P-201ENST00000516032 105 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 MTND2P26-201ENST00000528255 1029 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AP004833.3-201ENST00000531893 322 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC092133.1-201ENST00000565828 719 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC040162.2-201ENST00000573092 157 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 MIR3137-201ENST00000577367 75 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AP002906.1-201ENST00000603405 233 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC092608.3-201ENST00000625017 386 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 LINC02211-204ENST00000642024 1070 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 AC092451.3-201ENST00000625067 1343 ntBASIC7.52□□□□□ -1.2
PHC3Q8NDX5 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.52□□□□□ -1.2
PHC3Q8NDX5 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PHC3Q8NDX5 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PHC3Q8NDX5 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PHC3Q8NDX5 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
PHC3Q8NDX5 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
PHC3Q8NDX5 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
PHC3Q8NDX5 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PHC3Q8NDX5 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PHC3Q8NDX5 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms