Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SNRPBP1-201ENST00000443634 282 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 PFN1P11-201ENST00000445829 389 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AL161722.1-201ENST00000446972 1032 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC004692.1-201ENST00000455430 424 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 RN7SL492P-201ENST00000460700 295 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AP002383.5-201ENST00000542623 1161 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 SNRPCP20-201ENST00000588011 210 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AL352984.2-202ENST00000613699 155 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC018692.2-201ENST00000624130 348 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC073857.1-201ENST00000625082 1054 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 NEK2P2-201ENST00000438441 1338 ntBASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC71LQ8N9Z2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC092066.1-201ENST00000425131 317 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AL357632.1-201ENST00000426688 643 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 RPS10P21-201ENST00000430654 475 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 KRT18P53-201ENST00000431919 117 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AL390879.1-201ENST00000439143 386 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AL022237.1-201ENST00000446663 358 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 RPL7L1P3-201ENST00000455249 689 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 SNORA35.1-201ENST00000458908 128 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 ASNSP4-201ENST00000511103 447 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC021820.1-201ENST00000525564 808 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 SSU72P6-201ENST00000532644 488 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 OR4H6P-201ENST00000563771 921 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 MIR4420-201ENST00000583944 77 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC005495.1-201ENST00000586611 1211 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC092960.1-201ENST00000604762 351 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC116165.3-201ENST00000614524 400 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 AC135068.11-201ENST00000636378 921 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 RPS2P45-201ENST00000469997 2057 ntBASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms