Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.31□□□□□ -1.4
SUMO3P55854 SUMO1P1-201ENST00000497904 306 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AC021220.1-201ENST00000507445 630 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.31□□□□□ -1.4
SUMO3P55854 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 AC004923.2-201ENST00000529649 369 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.31□□□□□ -1.4
SUMO3P55854 AC103855.4-201ENST00000533158 265 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.31□□□□□ -1.4
SUMO3P55854 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.31□□□□□ -1.4
SUMO3P55854 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.31□□□□□ -1.4
SUMO3P55854 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.31□□□□□ -1.4
SUMO3P55854 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.31□□□□□ -1.4
SUMO3P55854 AL591767.3-201ENST00000554632 525 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AL445383.1-201ENST00000554689 874 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.31□□□□□ -1.4
SUMO3P55854 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SUMO3P55854 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.31□□□□□ -1.4
SUMO3P55854 AC091932.1-201ENST00000569381 427 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.31□□□□□ -1.4
SUMO3P55854 MTND1P8-201ENST00000571424 950 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.31□□□□□ -1.4
SUMO3P55854 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.31□□□□□ -1.4
SUMO3P55854 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.31□□□□□ -1.4
SUMO3P55854 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.31□□□□□ -1.4
SUMO3P55854 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.31□□□□□ -1.4
SUMO3P55854 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.31□□□□□ -1.4
SUMO3P55854 AC068620.3-201ENST00000602749 560 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.31□□□□□ -1.4
SUMO3P55854 AC112503.2-201ENST00000609005 552 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.31□□□□□ -1.4
SUMO3P55854 AC009283.1-201ENST00000615852 645 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AC005753.1-201ENST00000623837 618 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AL356118.1-201ENST00000635272 1078 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 TMEM30CP-203ENST00000637814 1035 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SUMO3P55854 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SUMO3P55854 AL034417.4-202ENST00000642135 2236 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
SUMO3P55854 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.31□□□□□ -1.4
SUMO3P55854 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.31□□□□□ -1.4
SUMO3P55854 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.3□□□□□ -1.4
SUMO3P55854 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.3□□□□□ -1.4
SUMO3P55854 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SUMO3P55854 AC132825.1-201ENST00000463573 2247 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 OFD1P17-201ENST00000437639 3018 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.3□□□□□ -1.4
SUMO3P55854 RPL9P21-201ENST00000392269 505 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 AL117344.1-201ENST00000407196 616 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.3□□□□□ -1.4
SUMO3P55854 MICG-208ENST00000416822 132 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 AL606495.1-201ENST00000422100 813 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.3□□□□□ -1.4
SUMO3P55854 OR52S1P-201ENST00000427016 937 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.3□□□□□ -1.4
SUMO3P55854 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 RN7SL492P-201ENST00000460700 295 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 RN7SL834P-201ENST00000461450 286 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 RPS16P9-201ENST00000477220 427 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.3□□□□□ -1.4
SUMO3P55854 RN7SL518P-201ENST00000491887 280 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.3□□□□□ -1.4
SUMO3P55854 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 RNA5SP278-201ENST00000517055 102 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 CARSP2-201ENST00000520688 277 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.3□□□□□ -1.4
SUMO3P55854 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.3□□□□□ -1.4
SUMO3P55854 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.3□□□□□ -1.4
SUMO3P55854 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SUMO3P55854 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.3□□□□□ -1.4
SUMO3P55854 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms