Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.84□□□□□ -1.31
PTPN9P43378 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
PTPN9P43378 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.84□□□□□ -1.31
PTPN9P43378 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.84□□□□□ -1.31
PTPN9P43378 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
PTPN9P43378 RN7SL208P-201ENST00000577964 296 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 AC114477.1-201ENST00000605097 605 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 AC015849.6-201ENST00000605454 474 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 NF1P10-201ENST00000613227 742 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 AC116165.3-201ENST00000614524 400 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 U1.41-201ENST00000617626 165 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.84□□□□□ -1.31
PTPN9P43378 AL596275.2-208ENST00000641192 594 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 AL121936.2-201ENST00000641935 662 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
PTPN9P43378 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
PTPN9P43378 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.84□□□□□ -1.31
PTPN9P43378 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
PTPN9P43378 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
PTPN9P43378 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
PTPN9P43378 FANCD2P2-201ENST00000437591 1400 ntBASIC6.84□□□□□ -1.32
PTPN9P43378 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
PTPN9P43378 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.83□□□□□ -1.32
PTPN9P43378 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 TNPO1P2-201ENST00000426249 2665 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 OR7A2P-201ENST00000304105 930 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.83□□□□□ -1.32
PTPN9P43378 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.83□□□□□ -1.32
PTPN9P43378 ARSFP1-201ENST00000398758 477 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 RANP6-201ENST00000413691 644 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.83□□□□□ -1.32
PTPN9P43378 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PTPN9P43378 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.83□□□□□ -1.32
PTPN9P43378 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.83□□□□□ -1.32
PTPN9P43378 AC003989.1-201ENST00000434569 565 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.83□□□□□ -1.32
PTPN9P43378 COL11A2P1-205ENST00000441798 676 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.83□□□□□ -1.32
PTPN9P43378 AC068491.1-201ENST00000449539 1241 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 MGAT2P1-201ENST00000449718 797 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.83□□□□□ -1.32
PTPN9P43378 RPS7P11-201ENST00000484240 586 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 RPL19P11-201ENST00000495944 589 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 AC114324.2-202ENST00000503812 134 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.83□□□□□ -1.32
PTPN9P43378 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 AC131935.1-201ENST00000524621 333 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.83□□□□□ -1.32
PTPN9P43378 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
PTPN9P43378 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
PTPN9P43378 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.83□□□□□ -1.32
PTPN9P43378 AC012175.1-201ENST00000603755 531 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 AC012254.5-201ENST00000623573 478 ntBASIC6.83□□□□□ -1.32
PTPN9P43378 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
PTPN9P43378 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.83□□□□□ -1.32
PTPN9P43378 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.83□□□□□ -1.32
PTPN9P43378 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PTPN9P43378 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
PTPN9P43378 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.83□□□□□ -1.32
PTPN9P43378 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.82□□□□□ -1.32
PTPN9P43378 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.82□□□□□ -1.32
PTPN9P43378 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.82□□□□□ -1.32
PTPN9P43378 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.82□□□□□ -1.32
PTPN9P43378 AP001157.1-201ENST00000550837 2339 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.82□□□□□ -1.32
PTPN9P43378 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 AC011455.2-201ENST00000599320 3336 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms