Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC8.2□□□□□ -1.1
COL15A1P39059 AL353743.3-201ENST00000442109 1468 ntBASIC8.2□□□□□ -1.1
COL15A1P39059 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.2□□□□□ -1.1
COL15A1P39059 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
COL15A1P39059 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
COL15A1P39059 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.2□□□□□ -1.1
COL15A1P39059 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.2□□□□□ -1.1
COL15A1P39059 AC104843.2-201ENST00000427666 297 ntBASIC8.2□□□□□ -1.1
COL15A1P39059 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.2□□□□□ -1.1
COL15A1P39059 RPL6P30-201ENST00000443382 862 ntBASIC8.2□□□□□ -1.1
COL15A1P39059 AC073109.1-201ENST00000445066 978 ntBASIC8.2□□□□□ -1.1
COL15A1P39059 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC8.2□□□□□ -1.1
COL15A1P39059 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC8.2□□□□□ -1.1
COL15A1P39059 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.2□□□□□ -1.1
COL15A1P39059 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.2□□□□□ -1.1
COL15A1P39059 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.2□□□□□ -1.1
COL15A1P39059 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.2□□□□□ -1.1
COL15A1P39059 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.2□□□□□ -1.1
COL15A1P39059 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.2□□□□□ -1.1
COL15A1P39059 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC8.2□□□□□ -1.1
COL15A1P39059 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
COL15A1P39059 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.2□□□□□ -1.1
COL15A1P39059 MIR4302-201ENST00000638058 60 ntBASIC8.2□□□□□ -1.1
COL15A1P39059 AC011455.2-201ENST00000599320 3336 ntBASIC8.2□□□□□ -1.1
COL15A1P39059 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
COL15A1P39059 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
COL15A1P39059 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
COL15A1P39059 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL15A1P39059 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL15A1P39059 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL15A1P39059 SAGE3P-201ENST00000619800 1635 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
COL15A1P39059 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL15A1P39059 NEK2P2-201ENST00000438441 1338 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.19□□□□□ -1.1
COL15A1P39059 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL15A1P39059 AL136984.1-201ENST00000607611 1893 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
COL15A1P39059 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL15A1P39059 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL15A1P39059 AC110373.1-201ENST00000505994 3505 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.19□□□□□ -1.1
COL15A1P39059 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.19□□□□□ -1.1
COL15A1P39059 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL15A1P39059 RNA5SP110-201ENST00000362638 115 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.19□□□□□ -1.1
COL15A1P39059 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.19□□□□□ -1.1
COL15A1P39059 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.19□□□□□ -1.1
COL15A1P39059 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC8.19□□□□□ -1.1
COL15A1P39059 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC8.19□□□□□ -1.1
COL15A1P39059 AL139156.3-201ENST00000454802 394 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.19□□□□□ -1.1
COL15A1P39059 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC8.19□□□□□ -1.1
COL15A1P39059 OR4D12P-201ENST00000509361 911 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 AC095052.1-201ENST00000509955 863 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 AC006499.4-201ENST00000510947 694 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.19□□□□□ -1.1
COL15A1P39059 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.19□□□□□ -1.1
COL15A1P39059 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.19□□□□□ -1.1
COL15A1P39059 AC007346.1-201ENST00000569208 867 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC8.19□□□□□ -1.1
COL15A1P39059 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
COL15A1P39059 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL15A1P39059 AC084782.1-201ENST00000564401 2465 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
COL15A1P39059 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.19□□□□□ -1.1
COL15A1P39059 OR52B5P-204ENST00000641744 3467 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.19□□□□□ -1.1
COL15A1P39059 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.18□□□□□ -1.1
COL15A1P39059 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.18□□□□□ -1.1
COL15A1P39059 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL15A1P39059 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.18□□□□□ -1.1
COL15A1P39059 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.18□□□□□ -1.1
COL15A1P39059 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL15A1P39059 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL15A1P39059 MROH3P-201ENST00000435735 2676 ntBASIC8.18□□□□□ -1.1
COL15A1P39059 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL15A1P39059 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL15A1P39059 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL15A1P39059 KARSP1-201ENST00000451871 1752 ntBASIC8.18□□□□□ -1.1
COL15A1P39059 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
COL15A1P39059 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL15A1P39059 OR2M1P-201ENST00000318104 951 ntBASIC8.18□□□□□ -1.1
COL15A1P39059 RN7SKP69-201ENST00000365390 305 ntBASIC8.18□□□□□ -1.1
COL15A1P39059 MIR130B-202ENST00000385018 82 ntBASIC8.18□□□□□ -1.1
COL15A1P39059 MIR640-201ENST00000385086 96 ntBASIC8.18□□□□□ -1.1
COL15A1P39059 AL512422.1-201ENST00000407033 553 ntBASIC8.18□□□□□ -1.1
COL15A1P39059 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms