Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.97□□□□□ -1.45
SHC1P29353 AC113191.1-201ENST00000517759 403 ntBASIC5.97□□□□□ -1.45
SHC1P29353 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.97□□□□□ -1.45
SHC1P29353 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.97□□□□□ -1.45
SHC1P29353 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.97□□□□□ -1.45
SHC1P29353 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.97□□□□□ -1.45
SHC1P29353 AP001542.1-201ENST00000591314 200 ntBASIC5.97□□□□□ -1.45
SHC1P29353 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.97□□□□□ -1.45
SHC1P29353 AL157899.1-201ENST00000604110 936 ntBASIC5.97□□□□□ -1.45
SHC1P29353 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHC1P29353 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.97□□□□□ -1.45
SHC1P29353 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.97□□□□□ -1.45
SHC1P29353 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.97□□□□□ -1.45
SHC1P29353 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHC1P29353 AC211486.4-201ENST00000621495 113 ntBASIC5.97□□□□□ -1.45
SHC1P29353 AC018659.2-201ENST00000624690 715 ntBASIC5.97□□□□□ -1.45
SHC1P29353 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.97□□□□□ -1.45
SHC1P29353 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.97□□□□□ -1.45
SHC1P29353 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.97□□□□□ -1.45
SHC1P29353 CLUHP10-201ENST00000631979 980 ntBASIC5.97□□□□□ -1.45
SHC1P29353 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHC1P29353 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHC1P29353 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.97□□□□□ -1.45
SHC1P29353 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.97□□□□□ -1.45
SHC1P29353 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.97□□□□□ -1.45
SHC1P29353 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHC1P29353 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHC1P29353 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHC1P29353 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.96□□□□□ -1.45
SHC1P29353 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHC1P29353 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.96□□□□□ -1.45
SHC1P29353 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHC1P29353 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
SHC1P29353 MAPK10-357ENST00000641831 2858 ntBASIC5.96□□□□□ -1.46
SHC1P29353 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.96□□□□□ -1.46
SHC1P29353 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.96□□□□□ -1.46
SHC1P29353 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 AL033519.1-201ENST00000407266 307 ntBASIC5.96□□□□□ -1.46
SHC1P29353 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.96□□□□□ -1.46
SHC1P29353 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 RPL23AP64-201ENST00000469465 435 ntBASIC5.96□□□□□ -1.46
SHC1P29353 AC022415.1-202ENST00000486612 523 ntBASIC5.96□□□□□ -1.46
SHC1P29353 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.96□□□□□ -1.46
SHC1P29353 AC098799.1-201ENST00000504752 800 ntBASIC5.96□□□□□ -1.46
SHC1P29353 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.96□□□□□ -1.46
SHC1P29353 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.96□□□□□ -1.46
SHC1P29353 AC026956.1-201ENST00000558741 396 ntBASIC5.96□□□□□ -1.46
SHC1P29353 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.96□□□□□ -1.46
SHC1P29353 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.96□□□□□ -1.46
SHC1P29353 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.96□□□□□ -1.46
SHC1P29353 AC106785.4-201ENST00000569492 412 ntBASIC5.96□□□□□ -1.46
SHC1P29353 AP003115.1-201ENST00000569849 463 ntBASIC5.96□□□□□ -1.46
SHC1P29353 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.96□□□□□ -1.46
SHC1P29353 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.96□□□□□ -1.46
SHC1P29353 AL049840.5-201ENST00000602827 552 ntBASIC5.96□□□□□ -1.46
SHC1P29353 AC097467.4-201ENST00000605504 141 ntBASIC5.96□□□□□ -1.46
SHC1P29353 AL390877.1-201ENST00000605704 214 ntBASIC5.96□□□□□ -1.46
SHC1P29353 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.96□□□□□ -1.46
SHC1P29353 AC004241.2-201ENST00000614562 444 ntBASIC5.96□□□□□ -1.46
SHC1P29353 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.96□□□□□ -1.46
SHC1P29353 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHC1P29353 MARK2P4-201ENST00000503381 2380 ntBASIC5.96□□□□□ -1.46
SHC1P29353 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.96□□□□□ -1.46
SHC1P29353 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 AC022613.3-201ENST00000560740 1346 ntBASIC5.96□□□□□ -1.46
SHC1P29353 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHC1P29353 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHC1P29353 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.95□□□□□ -1.46
SHC1P29353 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.95□□□□□ -1.46
SHC1P29353 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.95□□□□□ -1.46
SHC1P29353 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHC1P29353 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHC1P29353 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
SHC1P29353 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SHC1P29353 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHC1P29353 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHC1P29353 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SHC1P29353 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SHC1P29353 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHC1P29353 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHC1P29353 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SHC1P29353 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHC1P29353 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHC1P29353 AL049697.3-201ENST00000406493 982 ntBASIC5.95□□□□□ -1.46
SHC1P29353 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHC1P29353 UBTFL2-201ENST00000411859 1191 ntBASIC5.95□□□□□ -1.46
SHC1P29353 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.95□□□□□ -1.46
SHC1P29353 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.95□□□□□ -1.46
SHC1P29353 VN1R53P-201ENST00000429536 957 ntBASIC5.95□□□□□ -1.46
SHC1P29353 UBBP5-201ENST00000446970 266 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms