Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RB1P06400 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RB1P06400 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.03□□□□□ -1.28
RB1P06400 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.03□□□□□ -1.28
RB1P06400 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.03□□□□□ -1.28
RB1P06400 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.03□□□□□ -1.28
RB1P06400 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 LPAL2-203ENST00000454031 2498 ntBASIC7.03□□□□□ -1.28
RB1P06400 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
RB1P06400 AC083806.2-201ENST00000617795 2685 ntBASIC7.03□□□□□ -1.28
RB1P06400 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 HSPD1P9-201ENST00000420325 1636 ntBASIC7.03□□□□□ -1.28
RB1P06400 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.03□□□□□ -1.28
RB1P06400 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.03□□□□□ -1.28
RB1P06400 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RB1P06400 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.03□□□□□ -1.28
RB1P06400 HMGN1P20-201ENST00000411849 300 ntBASIC7.03□□□□□ -1.28
RB1P06400 MTND2P12-201ENST00000417560 1252 ntBASIC7.03□□□□□ -1.28
RB1P06400 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.03□□□□□ -1.28
RB1P06400 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.03□□□□□ -1.28
RB1P06400 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.03□□□□□ -1.28
RB1P06400 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.03□□□□□ -1.28
RB1P06400 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.03□□□□□ -1.28
RB1P06400 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.03□□□□□ -1.28
RB1P06400 SETP20-201ENST00000457046 852 ntBASIC7.03□□□□□ -1.28
RB1P06400 OR13C1P-201ENST00000457612 963 ntBASIC7.03□□□□□ -1.28
RB1P06400 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.03□□□□□ -1.28
RB1P06400 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.03□□□□□ -1.28
RB1P06400 AC131392.1-201ENST00000506490 633 ntBASIC7.03□□□□□ -1.28
RB1P06400 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.03□□□□□ -1.28
RB1P06400 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.03□□□□□ -1.28
RB1P06400 AC122713.1-201ENST00000518368 1015 ntBASIC7.03□□□□□ -1.28
RB1P06400 TRIM77BP-201ENST00000524985 1119 ntBASIC7.03□□□□□ -1.28
RB1P06400 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.03□□□□□ -1.28
RB1P06400 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.03□□□□□ -1.28
RB1P06400 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.03□□□□□ -1.28
RB1P06400 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.03□□□□□ -1.28
RB1P06400 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.03□□□□□ -1.28
RB1P06400 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 RN7SL208P-201ENST00000577964 296 ntBASIC7.03□□□□□ -1.28
RB1P06400 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.03□□□□□ -1.28
RB1P06400 MIR6085-201ENST00000618314 110 ntBASIC7.03□□□□□ -1.28
RB1P06400 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.03□□□□□ -1.28
RB1P06400 SNX18P12-201ENST00000624821 759 ntBASIC7.03□□□□□ -1.28
RB1P06400 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.03□□□□□ -1.28
RB1P06400 AC073488.9-201ENST00000631601 754 ntBASIC7.03□□□□□ -1.28
RB1P06400 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
RB1P06400 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.03□□□□□ -1.28
RB1P06400 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RB1P06400 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 AC104837.1-201ENST00000444644 1587 ntBASIC7.03□□□□□ -1.28
RB1P06400 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RB1P06400 AC034111.1-201ENST00000562143 3770 ntBASIC7.03□□□□□ -1.28
RB1P06400 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
RB1P06400 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
RB1P06400 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RB1P06400 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.02□□□□□ -1.29
RB1P06400 AC241584.2-201ENST00000637142 2090 ntBASIC7.02□□□□□ -1.29
RB1P06400 LYARP1-201ENST00000436977 1501 ntBASIC7.02□□□□□ -1.29
RB1P06400 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.02□□□□□ -1.29
RB1P06400 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
RB1P06400 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.02□□□□□ -1.29
RB1P06400 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RB1P06400 AP003119.3-201ENST00000566747 4192 ntBASIC7.02□□□□□ -1.29
RB1P06400 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.02□□□□□ -1.29
RB1P06400 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
RB1P06400 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RB1P06400 RPL9P21-201ENST00000392269 505 ntBASIC7.02□□□□□ -1.29
RB1P06400 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.02□□□□□ -1.29
RB1P06400 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.02□□□□□ -1.29
RB1P06400 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.02□□□□□ -1.29
RB1P06400 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.02□□□□□ -1.29
RB1P06400 AC104843.2-201ENST00000427666 297 ntBASIC7.02□□□□□ -1.29
RB1P06400 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.02□□□□□ -1.29
RB1P06400 AC245047.1-201ENST00000433276 873 ntBASIC7.02□□□□□ -1.29
RB1P06400 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.02□□□□□ -1.29
RB1P06400 EMC3-AS1-205ENST00000438698 534 ntBASIC7.02□□□□□ -1.29
RB1P06400 RPL6P30-201ENST00000443382 862 ntBASIC7.02□□□□□ -1.29
RB1P06400 AC097463.1-201ENST00000447288 481 ntBASIC7.02□□□□□ -1.29
RB1P06400 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.02□□□□□ -1.29
RB1P06400 AL359839.1-201ENST00000451975 1160 ntBASIC7.02□□□□□ -1.29
RB1P06400 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.02□□□□□ -1.29
RB1P06400 SEPT14P1-201ENST00000458703 648 ntBASIC7.02□□□□□ -1.29
RB1P06400 AC008429.2-201ENST00000523057 864 ntBASIC7.02□□□□□ -1.29
RB1P06400 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.02□□□□□ -1.29
RB1P06400 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC7.02□□□□□ -1.29
RB1P06400 AC106785.4-201ENST00000569492 412 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms