Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.11□□□□□ -1.27
UBE4BO95155 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.11□□□□□ -1.27
UBE4BO95155 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 SNORA11.6-201ENST00000619030 128 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 MIR6503-201ENST00000622884 86 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.11□□□□□ -1.27
UBE4BO95155 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
UBE4BO95155 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.11□□□□□ -1.27
UBE4BO95155 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
UBE4BO95155 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 LCOR-201ENST00000286067 4542 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
UBE4BO95155 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
UBE4BO95155 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
UBE4BO95155 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
UBE4BO95155 MIR551B-201ENST00000384984 96 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 AL033519.1-201ENST00000407266 307 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 U3.43-201ENST00000410734 213 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.1□□□□□ -1.27
UBE4BO95155 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
UBE4BO95155 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.1□□□□□ -1.27
UBE4BO95155 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.1□□□□□ -1.27
UBE4BO95155 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.1□□□□□ -1.27
UBE4BO95155 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.1□□□□□ -1.27
UBE4BO95155 RN7SL413P-201ENST00000482700 297 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 AC022206.1-201ENST00000495947 347 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.1□□□□□ -1.27
UBE4BO95155 COX6B1P4-201ENST00000519826 484 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 AP005639.1-201ENST00000526939 192 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
UBE4BO95155 AC073916.1-201ENST00000545095 130 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 AL121579.2-201ENST00000555466 590 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.1□□□□□ -1.27
UBE4BO95155 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.1□□□□□ -1.27
UBE4BO95155 AC011497.2-201ENST00000600255 639 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.1□□□□□ -1.27
UBE4BO95155 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
UBE4BO95155 AC211486.4-201ENST00000621495 113 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 AC135068.11-201ENST00000636378 921 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
UBE4BO95155 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
UBE4BO95155 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
UBE4BO95155 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
UBE4BO95155 AL022323.4-201ENST00000623980 13120 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.1□□□□□ -1.27
UBE4BO95155 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
UBE4BO95155 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.1□□□□□ -1.27
UBE4BO95155 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
UBE4BO95155 AC067942.1-201ENST00000488045 1493 ntBASIC7.1□□□□□ -1.27
UBE4BO95155 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
UBE4BO95155 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
UBE4BO95155 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.09□□□□□ -1.27
UBE4BO95155 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
UBE4BO95155 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.09□□□□□ -1.27
UBE4BO95155 UBTFL2-201ENST00000411859 1191 ntBASIC7.09□□□□□ -1.27
UBE4BO95155 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.09□□□□□ -1.27
UBE4BO95155 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.09□□□□□ -1.27
UBE4BO95155 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.09□□□□□ -1.27
UBE4BO95155 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
UBE4BO95155 MED28P4-201ENST00000433137 572 ntBASIC7.09□□□□□ -1.27
UBE4BO95155 AL645939.3-201ENST00000435408 225 ntBASIC7.09□□□□□ -1.27
UBE4BO95155 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
UBE4BO95155 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
UBE4BO95155 RN7SL393P-201ENST00000463588 296 ntBASIC7.09□□□□□ -1.27
UBE4BO95155 AC018645.1-201ENST00000505003 109 ntBASIC7.09□□□□□ -1.27
UBE4BO95155 AC106800.3-201ENST00000511389 308 ntBASIC7.09□□□□□ -1.27
UBE4BO95155 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.09□□□□□ -1.27
UBE4BO95155 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.09□□□□□ -1.27
UBE4BO95155 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.09□□□□□ -1.27
UBE4BO95155 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.09□□□□□ -1.27
UBE4BO95155 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.09□□□□□ -1.27
UBE4BO95155 AL008582.1-201ENST00000609612 442 ntBASIC7.09□□□□□ -1.27
UBE4BO95155 LINC02495-203ENST00000636704 242 ntBASIC7.09□□□□□ -1.27
UBE4BO95155 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
UBE4BO95155 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
UBE4BO95155 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
UBE4BO95155 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.09□□□□□ -1.27
UBE4BO95155 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
UBE4BO95155 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
UBE4BO95155 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
UBE4BO95155 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
UBE4BO95155 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.09□□□□□ -1.27
UBE4BO95155 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
UBE4BO95155 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
UBE4BO95155 AC125238.2-201ENST00000430003 1440 ntBASIC7.09□□□□□ -1.28
UBE4BO95155 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.09□□□□□ -1.28
UBE4BO95155 AC107980.1-201ENST00000558671 3355 ntBASIC7.09□□□□□ -1.28
UBE4BO95155 CUBNP3-201ENST00000457461 1784 ntBASIC7.08□□□□□ -1.28
UBE4BO95155 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE4BO95155 AC119674.1-213ENST00000641177 1386 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms