Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX4O60224 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.05□□□□□ -1.44
SSX4O60224 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX4O60224 PRDX1P1-201ENST00000449329 596 ntBASIC6.05□□□□□ -1.44
SSX4O60224 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX4O60224 RPL31P11-202ENST00000454082 372 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC007386.1-201ENST00000455212 582 ntBASIC6.05□□□□□ -1.44
SSX4O60224 RN7SL372P-201ENST00000461982 298 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC090589.1-201ENST00000473109 362 ntBASIC6.05□□□□□ -1.44
SSX4O60224 RN7SL502P-201ENST00000481857 290 ntBASIC6.05□□□□□ -1.44
SSX4O60224 RN7SL741P-201ENST00000482473 289 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC096743.1-201ENST00000485172 319 ntBASIC6.05□□□□□ -1.44
SSX4O60224 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.05□□□□□ -1.44
SSX4O60224 CCNHP1-201ENST00000513311 678 ntBASIC6.05□□□□□ -1.44
SSX4O60224 DCAF13P2-201ENST00000514188 555 ntBASIC6.05□□□□□ -1.44
SSX4O60224 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX4O60224 CARSP2-201ENST00000520688 277 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX4O60224 AC021820.1-201ENST00000525564 808 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX4O60224 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX4O60224 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 AL591767.3-201ENST00000554632 525 ntBASIC6.05□□□□□ -1.44
SSX4O60224 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX4O60224 MIR4312-201ENST00000579909 76 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX4O60224 PRR13P5-201ENST00000596581 442 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC068802.1-201ENST00000603420 732 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC091193.1-201ENST00000604640 448 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.05□□□□□ -1.44
SSX4O60224 AC138473.1-201ENST00000605717 526 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX4O60224 AL138960.1-201ENST00000613838 513 ntBASIC6.05□□□□□ -1.44
SSX4O60224 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC087894.3-201ENST00000623682 349 ntBASIC6.05□□□□□ -1.44
SSX4O60224 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX4O60224 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SSX4O60224 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 AC006511.3-201ENST00000624929 1783 ntBASIC6.05□□□□□ -1.44
SSX4O60224 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX4O60224 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SSX4O60224 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.05□□□□□ -1.44
SSX4O60224 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX4O60224 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX4O60224 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SSX4O60224 AC105749.1-201ENST00000631338 2008 ntBASIC6.04□□□□□ -1.44
SSX4O60224 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 PARP4P1-201ENST00000435945 2337 ntBASIC6.04□□□□□ -1.44
SSX4O60224 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSX4O60224 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 AL731556.1-201ENST00000394628 3711 ntBASIC6.04□□□□□ -1.44
SSX4O60224 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 OR11H13P-201ENST00000359695 979 ntBASIC6.04□□□□□ -1.44
SSX4O60224 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX4O60224 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSX4O60224 SNORA70H-201ENST00000383910 135 ntBASIC6.04□□□□□ -1.44
SSX4O60224 SNORA70J-201ENST00000384182 135 ntBASIC6.04□□□□□ -1.44
SSX4O60224 SNORA70.9-201ENST00000384370 135 ntBASIC6.04□□□□□ -1.44
SSX4O60224 MIR191-201ENST00000384873 92 ntBASIC6.04□□□□□ -1.44
SSX4O60224 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 MIR1266-201ENST00000408125 84 ntBASIC6.04□□□□□ -1.44
SSX4O60224 AC099535.1-201ENST00000408928 371 ntBASIC6.04□□□□□ -1.44
SSX4O60224 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX4O60224 RN7SKP205-201ENST00000410999 307 ntBASIC6.04□□□□□ -1.44
SSX4O60224 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 HMGB1P32-201ENST00000425971 565 ntBASIC6.04□□□□□ -1.44
SSX4O60224 RSL24D1P2-201ENST00000445584 366 ntBASIC6.04□□□□□ -1.44
SSX4O60224 RPSAP7-201ENST00000456871 885 ntBASIC6.04□□□□□ -1.44
SSX4O60224 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX4O60224 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX4O60224 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX4O60224 GLYATL1P4-201ENST00000529326 906 ntBASIC6.04□□□□□ -1.44
SSX4O60224 AC090115.2-201ENST00000548060 883 ntBASIC6.04□□□□□ -1.44
SSX4O60224 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX4O60224 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX4O60224 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX4O60224 AC024267.2-201ENST00000582737 417 ntBASIC6.04□□□□□ -1.44
SSX4O60224 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX4O60224 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX4O60224 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX4O60224 AL359704.2-201ENST00000604335 521 ntBASIC6.04□□□□□ -1.44
SSX4O60224 SNORA35B-201ENST00000607417 129 ntBASIC6.04□□□□□ -1.44
SSX4O60224 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.04□□□□□ -1.44
SSX4O60224 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 AC120057.5-201ENST00000623840 154 ntBASIC6.04□□□□□ -1.44
SSX4O60224 AC008626.2-201ENST00000624425 248 ntBASIC6.04□□□□□ -1.44
SSX4O60224 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SSX4O60224 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 AC092070.2-203ENST00000598377 3644 ntBASIC6.04□□□□□ -1.44
SSX4O60224 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms