Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AP002512.4-202ENST00000641599 4530 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 RN7SKP107-201ENST00000364157 290 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 SNORD15A-201ENST00000384214 148 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 IFNA12P-201ENST00000413147 571 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 GAPDHP55-201ENST00000423136 803 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 RN7SL338P-201ENST00000481467 293 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 TRBV8-1-201ENST00000481590 279 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC087257.2-201ENST00000538759 928 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 HNRNPCP1-201ENST00000556181 766 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 OR4N3P-201ENST00000559395 818 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC012181.2-201ENST00000570210 699 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 RN7SL25P-201ENST00000583862 260 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC104184.1-201ENST00000607513 721 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC018926.1-201ENST00000616335 435 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AP000484.1-201ENST00000620067 1252 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC135068.4-201ENST00000622949 925 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC097460.3-201ENST00000623099 442 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC241377.2-202ENST00000636462 997 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AL354702.2-202ENST00000641481 890 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC66A2RUB6 AC011455.2-201ENST00000599320 3336 ntBASIC7.49□□□□□ -1.21
CCDC66A2RUB6 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 FGG-204ENST00000405164 1539 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 Z95114.1-201ENST00000624264 14574 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 RNU6-1017P-201ENST00000363613 106 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 SNORD51.1-201ENST00000365405 77 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 SNORA70.8-201ENST00000384231 136 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 RPSAP62-201ENST00000432596 833 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 MED28P4-201ENST00000433137 572 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 RPL6P24-201ENST00000445338 864 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 RN7SL213P-201ENST00000463482 317 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 RN7SL91P-201ENST00000469313 291 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 RPL7P17-201ENST00000470927 724 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 RN7SL165P-201ENST00000477476 291 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC044860.3-201ENST00000559957 368 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 EEF1B2P1-201ENST00000567221 672 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 RPS7P1-201ENST00000571702 585 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC090286.3-201ENST00000573133 187 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 RN7SL667P-201ENST00000582817 298 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC006946.3-201ENST00000609791 756 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC66A2RUB6 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms