Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 SRP68P2-201ENST00000456184 254 ntBASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AC079193.1-201ENST00000460497 588 ntBASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 RN7SL552P-201ENST00000462094 276 ntBASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AL355032.1-201ENST00000472981 438 ntBASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AC091849.1-201ENST00000509920 121 ntBASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 OR52H2P-201ENST00000514607 902 ntBASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AL583832.1-201ENST00000603227 784 ntBASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 PTCHD3P1-201ENST00000612350 537 ntBASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AC010320.5-201ENST00000619124 676 ntBASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AC133485.6-201ENST00000624045 688 ntBASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC28BQ9BUN5 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 CYP4F30P-202ENST00000420048 405 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AC003989.1-201ENST00000434569 565 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 PFN1P11-201ENST00000445829 389 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 RPL7AP71-201ENST00000451120 739 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AC005517.1-201ENST00000452091 489 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 RPL26P30-201ENST00000453533 435 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 RPS4XP19-201ENST00000460237 736 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 RN7SL263P-201ENST00000467969 290 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 RN7SL145P-201ENST00000469955 296 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AL135933.1-201ENST00000498657 802 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 NIFKP4-201ENST00000567275 1192 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AL592504.1-201ENST00000605319 439 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AC104117.5-201ENST00000606195 547 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 pRNA.9-201ENST00000618609 89 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 AC087516.1-201ENST00000561236 2428 ntBASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC28BQ9BUN5 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 SHQ1P1-201ENST00000437111 1544 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms