Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SNX18P26-201ENST00000458433 740 ntBASIC5.66□□□□□ -1.5
CPNE2Q96FN4 AC092824.1-201ENST00000483524 576 ntBASIC5.66□□□□□ -1.5
CPNE2Q96FN4 AC131392.1-201ENST00000506490 633 ntBASIC5.66□□□□□ -1.5
CPNE2Q96FN4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 AC084337.1-201ENST00000524809 686 ntBASIC5.66□□□□□ -1.5
CPNE2Q96FN4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 AL445383.1-201ENST00000554689 874 ntBASIC5.66□□□□□ -1.5
CPNE2Q96FN4 MIR5682-201ENST00000584864 76 ntBASIC5.66□□□□□ -1.5
CPNE2Q96FN4 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 AL035417.2-201ENST00000603887 796 ntBASIC5.66□□□□□ -1.5
CPNE2Q96FN4 AC083964.1-201ENST00000607549 630 ntBASIC5.66□□□□□ -1.5
CPNE2Q96FN4 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CPNE2Q96FN4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 OR2A3P-202ENST00000641249 1776 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC011455.2-201ENST00000599320 3336 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC011369.2-201ENST00000624423 1567 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 MIR99A-201ENST00000384906 81 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 LDHAP5-201ENST00000394996 622 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 PHBP4-201ENST00000437447 837 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 OR13K1P-201ENST00000444577 975 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 RPL26P30-201ENST00000453533 435 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 RPS16P9-201ENST00000477220 427 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 RPL21P42-201ENST00000488408 464 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 IGKV2D-38-201ENST00000518423 240 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 CARSP2-201ENST00000520688 277 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 OR4A6P-201ENST00000534364 970 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 MIR378C-201ENST00000578683 81 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 MIR6807-201ENST00000621968 92 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AC018692.2-201ENST00000624130 348 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 AL035425.4-201ENST00000624509 1063 ntBASIC5.65□□□□□ -1.5
CPNE2Q96FN4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.65□□□□□ -1.5
CPNE2Q96FN4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 KYNUP2-201ENST00000582280 1329 ntBASIC5.65□□□□□ -1.51
CPNE2Q96FN4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 AC079753.1-201ENST00000623243 3868 ntBASIC5.65□□□□□ -1.51
CPNE2Q96FN4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPNE2Q96FN4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CPNE2Q96FN4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CPNE2Q96FN4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CPNE2Q96FN4 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CPNE2Q96FN4 AP002512.4-202ENST00000641599 4530 ntBASIC5.64□□□□□ -1.51
CPNE2Q96FN4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms