Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MTND2P12-201ENST00000417560 1252 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 HNRNPDLP2-201ENST00000455248 751 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 NMNAT1P3-201ENST00000457517 888 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 RN7SL216P-201ENST00000471607 298 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 HESX1-202ENST00000473921 757 ntTSL 5 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 RN7SL143P-201ENST00000496780 297 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AL137000.1-201ENST00000610528 1244 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AC244100.4-201ENST00000617747 388 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AP003400.6-201ENST00000624698 740 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AC007603.3-201ENST00000636915 979 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 AC087392.3-202ENST00000358446 1754 ntBASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.06□□□□□ -1.12
CHMP4CQ96CF2 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 AL590128.1-201ENST00000433407 286 ntBASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 RPL23AP28-201ENST00000448062 470 ntBASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 RN7SKP198-201ENST00000459286 306 ntBASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 AC083806.1-201ENST00000468934 316 ntBASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 AC092349.1-201ENST00000504903 310 ntBASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 RNA5SP278-201ENST00000517055 102 ntBASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 OR4C49P-201ENST00000563891 900 ntBASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 CTSLP2-201ENST00000580501 394 ntBASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 AC004908.1-201ENST00000606572 541 ntBASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 SELE-203ENST00000367775 3389 ntTSL 5 BASIC8.05□□□□□ -1.12
CHMP4CQ96CF2 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 Z97989.1-201ENST00000531702 2421 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 RPL24P4-201ENST00000326586 421 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 RN7SKP191-201ENST00000364713 306 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 PTPN2P1-201ENST00000423212 1072 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 MTND2P11-201ENST00000423638 648 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AP003385.1-201ENST00000426387 893 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms