Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC011455.2-201ENST00000599320 3336 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AL353763.1-201ENST00000624467 1628 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 RNA5SP177-201ENST00000410122 107 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 SPATA20P1-201ENST00000423089 438 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AL590128.1-201ENST00000433407 286 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ANXA2P2-201ENST00000435128 1020 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ST13P2-201ENST00000438916 1109 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC009237.1-201ENST00000442127 744 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AL928654.1-201ENST00000476081 354 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 PPP1R2P6-201ENST00000478565 588 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC091849.1-201ENST00000509920 121 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 NATP-201ENST00000523491 878 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 SNRPCP6-201ENST00000528310 210 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC140063.1-201ENST00000541343 259 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC084033.2-201ENST00000551532 967 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 BMS1P8-201ENST00000565049 1178 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AL031658.2-201ENST00000616850 651 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 pRNA.9-201ENST00000618609 89 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AP001264.1-201ENST00000620602 703 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 MRPL57P1-201ENST00000621486 265 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC008626.2-201ENST00000624425 248 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71LQ8N9Z2 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AC023886.2-201ENST00000321285 411 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 RPL34P27-201ENST00000428810 349 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 PRPS1P2-201ENST00000430496 937 ntBASIC5.4□□□□□ -1.54
CCDC71LQ8N9Z2 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms