Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC023855.1-201ENST00000585899 359 ntTSL 4 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC020908.1-201ENST00000598893 280 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC133552.5-201ENST00000604266 540 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AF146191.1-201ENST00000604941 889 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 uc_338.3-201ENST00000613268 181 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AL353608.4-201ENST00000624487 1188 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC079316.2-201ENST00000623545 1375 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 ELF2P3-201ENST00000445099 1506 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 TEX21P-201ENST00000447107 1476 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AL359922.2-201ENST00000581788 3017 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 CRYGA-201ENST00000304502 609 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 RNA5-8SP2-201ENST00000363564 152 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 Y_RNA.302-201ENST00000364997 102 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 GSTA5-202ENST00000370989 892 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 RNU6-185P-201ENST00000384421 107 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 HSPB1P1-201ENST00000423240 256 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 GLRXP1-201ENST00000423261 334 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 GYG1P2-201ENST00000426437 1006 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC000111.3-201ENST00000433478 193 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC002064.1-201ENST00000445784 733 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AL359091.1-201ENST00000449048 1734 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 PAXBP1P1-201ENST00000449315 447 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC110749.1-201ENST00000462007 357 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 RN7SL302P-201ENST00000475999 300 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC093270.1-201ENST00000482584 486 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 RPS3P7-201ENST00000488662 726 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 GAPDHP47-201ENST00000489113 999 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC105391.1-201ENST00000503155 1045 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC093281.2-201ENST00000510153 597 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 IGJP1-201ENST00000522682 475 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 LRTOMT-216ENST00000539271 570 ntTSL 4 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 ASB8-211ENST00000539528 839 ntTSL 3 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 SOX5-213ENST00000541847 758 ntTSL 3 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 LINC00929-205ENST00000557672 514 ntTSL 3 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 OR1D5-201ENST00000575751 939 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 BNIP3P33-201ENST00000598912 569 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AL078623.1-201ENST00000602702 907 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AL109936.2-201ENST00000605350 650 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC024580.1-201ENST00000623020 674 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 AC016717.3-201ENST00000624730 554 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 PCAT14-203ENST00000629869 976 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 LINC01588-217ENST00000635379 1595 ntTSL 5 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 TNNT3-218ENST00000641787 924 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms