Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 AL356585.10-201ENST00000641883 123 ntBASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 AL139805.2-201ENST00000455305 2433 ntBASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM48Q8IWZ4 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AL445523.1-201ENST00000451184 1362 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC093844.1-201ENST00000514910 1361 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 RNA5SP472-201ENST00000363868 119 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 MIR138-2-201ENST00000384916 84 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 ZNF602P-201ENST00000405929 924 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC068138.1-201ENST00000412635 217 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AL157698.1-201ENST00000415190 1011 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 LUZP4P1-201ENST00000415420 344 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC241520.1-201ENST00000422654 1099 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 EIF4A1P5-201ENST00000428062 1095 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 RPS26P4-201ENST00000431743 355 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC245047.2-201ENST00000441060 530 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC114928.1-201ENST00000446516 415 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 ST13P21-201ENST00000453250 1098 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 NPM1P29-201ENST00000483112 803 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AP000563.1-201ENST00000490865 758 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 RN7SL775P-201ENST00000498361 336 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 CFI-204ENST00000510800 667 ntTSL 2 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC114940.1-201ENST00000512162 1265 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 PGAM4P2-201ENST00000512491 721 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 RNU6-276P-201ENST00000516114 96 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 RNU6-943P-201ENST00000516960 98 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 ST13P6-201ENST00000522430 1102 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC016180.1-201ENST00000567945 403 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AP000919.1-202ENST00000581139 1264 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AL022067.1-201ENST00000602426 454 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC092960.1-201ENST00000604762 351 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 OR7A19P-201ENST00000608051 733 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC092954.1-201ENST00000609121 445 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 MIR6883-201ENST00000614952 78 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC231759.1-201ENST00000616455 597 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC078880.5-201ENST00000617845 421 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AL669942.2-201ENST00000620352 697 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC119674.1-201ENST00000641611 1210 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms