Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AK4P6-201ENST00000505168 528 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 SNX18P25-201ENST00000510539 758 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.3□□□□□ -1.4
CLRN1P58418 SNORA19.3-201ENST00000516165 130 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 UBTFL10-201ENST00000528532 562 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 GLYATL1P4-201ENST00000529326 906 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.3□□□□□ -1.4
CLRN1P58418 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.3□□□□□ -1.4
CLRN1P58418 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.3□□□□□ -1.4
CLRN1P58418 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 MRPS36P5-201ENST00000551909 298 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.3□□□□□ -1.4
CLRN1P58418 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 RN7SL366P-201ENST00000577957 292 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.3□□□□□ -1.4
CLRN1P58418 IGLJCOR18-201ENST00000584002 424 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 AC040904.1-201ENST00000590850 223 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AL589765.5-201ENST00000596133 515 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AL049829.3-202ENST00000604278 711 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 OR7A19P-201ENST00000608051 733 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 FRG2MP-201ENST00000613317 856 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC006386.1-201ENST00000619436 415 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 BX005040.2-201ENST00000620504 370 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 FRG1DP-201ENST00000635586 771 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 AC008691.1-209ENST00000642094 814 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.3□□□□□ -1.4
CLRN1P58418 ENO1P4-201ENST00000416471 1785 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.3□□□□□ -1.4
CLRN1P58418 CDY5P-201ENST00000411487 1580 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 CDY9P-201ENST00000451397 1580 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.3□□□□□ -1.4
CLRN1P58418 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CLRN1P58418 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 MRPS17P1-201ENST00000596009 3130 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 AL451064.2-201ENST00000623514 1654 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
CLRN1P58418 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CLRN1P58418 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CLRN1P58418 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CLRN1P58418 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.29□□□□□ -1.4
CLRN1P58418 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 MIR152-201ENST00000385212 87 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CLRN1P58418 AC226101.1-201ENST00000401483 387 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 ZNF602P-201ENST00000405929 924 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.29□□□□□ -1.4
CLRN1P58418 RN7SKP236-201ENST00000410635 284 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 AC098592.2-201ENST00000413158 265 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 AL606490.7-201ENST00000433136 191 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 AL355355.1-201ENST00000442900 793 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 RPL7P55-201ENST00000450522 746 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 WBP1LP1-201ENST00000460451 896 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 RN7SL392P-201ENST00000473024 299 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 AL928654.1-201ENST00000476081 354 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 MYL6P4-201ENST00000477911 453 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 HMGB1P3-201ENST00000502802 616 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 RNU6-319P-201ENST00000516025 108 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 OR7E161P-201ENST00000533722 967 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CLRN1P58418 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 AC008147.3-201ENST00000548666 354 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 MIR4685-201ENST00000578185 69 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.29□□□□□ -1.4
CLRN1P58418 AP000919.1-202ENST00000581139 1264 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms