Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC4P56524 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
HDAC4P56524 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.95□□□□□ -1.3
HDAC4P56524 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
HDAC4P56524 AP000432.2-201ENST00000624164 2048 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HDAC4P56524 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HDAC4P56524 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 RN7SKP296-201ENST00000411185 341 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 RNU2-18P-201ENST00000411224 162 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 PTPN2P1-201ENST00000423212 1072 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.95□□□□□ -1.3
HDAC4P56524 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC4P56524 AC068522.1-201ENST00000482895 345 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 AC063943.2-201ENST00000495697 534 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.95□□□□□ -1.3
HDAC4P56524 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.95□□□□□ -1.3
HDAC4P56524 AC139713.1-202ENST00000512366 460 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HDAC4P56524 AP003080.1-202ENST00000526526 915 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC4P56524 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC4P56524 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC4P56524 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.95□□□□□ -1.3
HDAC4P56524 ANP32BP1-202ENST00000568553 737 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 MTATP6P25-201ENST00000574491 261 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 ARGFXP2-201ENST00000579304 949 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC4P56524 AL591222.2-201ENST00000604443 754 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 AC005393.1-201ENST00000617916 584 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 AC127071.2-201ENST00000623293 527 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 AC009120.7-201ENST00000623452 780 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HDAC4P56524 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.95□□□□□ -1.3
HDAC4P56524 MKI67P1-201ENST00000604297 1460 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 AC007012.2-201ENST00000623206 1676 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
HDAC4P56524 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
HDAC4P56524 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.95□□□□□ -1.3
HDAC4P56524 PSMC1P6-201ENST00000477233 1319 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
HDAC4P56524 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.95□□□□□ -1.3
HDAC4P56524 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 OR4G1P-202ENST00000641173 1788 ntBASIC6.95□□□□□ -1.3
HDAC4P56524 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HDAC4P56524 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
HDAC4P56524 AC093297.3-201ENST00000607056 2517 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC4P56524 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC4P56524 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.94□□□□□ -1.3
HDAC4P56524 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC4P56524 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC4P56524 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC4P56524 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC4P56524 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC4P56524 RN7SKP184-201ENST00000362348 333 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 RNA5SP321-201ENST00000362722 111 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC4P56524 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC4P56524 AC099535.1-201ENST00000408928 371 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.94□□□□□ -1.3
HDAC4P56524 OR52N3P-201ENST00000413417 934 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.94□□□□□ -1.3
HDAC4P56524 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC4P56524 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC4P56524 MTCO3P17-201ENST00000443775 513 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.94□□□□□ -1.3
HDAC4P56524 AL139156.3-201ENST00000454802 394 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 AC099340.1-201ENST00000475247 599 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 AL390198.2-201ENST00000510553 222 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC4P56524 AC089984.3-201ENST00000552838 363 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC4P56524 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC4P56524 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.94□□□□□ -1.3
HDAC4P56524 AC091133.5-201ENST00000603088 301 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 MIR6070-201ENST00000613967 103 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 MIR6849-201ENST00000618543 69 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC4P56524 AC012653.2-201ENST00000621880 420 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC4P56524 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
HDAC4P56524 AC018692.2-201ENST00000624130 348 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 AL035425.4-201ENST00000624509 1063 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 AL162377.2-201ENST00000624532 337 ntBASIC6.94□□□□□ -1.3
HDAC4P56524 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms