Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.33□□□□□ -1.4
SUMO3P55854 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SUMO3P55854 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.33□□□□□ -1.4
SUMO3P55854 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SUMO3P55854 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.32□□□□□ -1.4
SUMO3P55854 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.32□□□□□ -1.4
SUMO3P55854 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.32□□□□□ -1.4
SUMO3P55854 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SUMO3P55854 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SUMO3P55854 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SUMO3P55854 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SUMO3P55854 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SUMO3P55854 RN7SKP47-201ENST00000365347 328 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SUMO3P55854 PPIAP26-201ENST00000377951 522 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 PDCL3P5-201ENST00000398028 722 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 NACAP7-201ENST00000407371 609 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 RN7SKP268-201ENST00000411107 316 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.32□□□□□ -1.4
SUMO3P55854 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.32□□□□□ -1.4
SUMO3P55854 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.32□□□□□ -1.4
SUMO3P55854 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.32□□□□□ -1.4
SUMO3P55854 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
SUMO3P55854 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.32□□□□□ -1.4
SUMO3P55854 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.32□□□□□ -1.4
SUMO3P55854 MGAT2P1-201ENST00000449718 797 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 RPS26P11-201ENST00000463445 348 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 RPS26P6-201ENST00000475156 348 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 RPS10P28-201ENST00000480396 498 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AC105420.1-201ENST00000504389 582 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.32□□□□□ -1.4
SUMO3P55854 HMGN1P17-201ENST00000513734 295 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SUMO3P55854 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.32□□□□□ -1.4
SUMO3P55854 SOX5P1-201ENST00000524155 1127 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.32□□□□□ -1.4
SUMO3P55854 MIR4800-201ENST00000537353 80 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.32□□□□□ -1.4
SUMO3P55854 DPPA3P2-201ENST00000553589 478 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.32□□□□□ -1.4
SUMO3P55854 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.32□□□□□ -1.4
SUMO3P55854 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.32□□□□□ -1.4
SUMO3P55854 WDR45BP1-201ENST00000583470 1029 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SUMO3P55854 SIGLEC31P-201ENST00000594237 551 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AC023206.1-201ENST00000605824 298 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AC090912.3-201ENST00000609775 533 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AC245407.2-201ENST00000614199 451 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AC012629.3-201ENST00000623397 328 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AC090617.9-201ENST00000623751 147 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SUMO3P55854 CTAGE11P-201ENST00000451540 2353 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SUMO3P55854 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SUMO3P55854 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SUMO3P55854 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SUMO3P55854 OR2AH1P-202ENST00000641232 2744 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 AP000641.1-201ENST00000531988 1639 ntBASIC6.32□□□□□ -1.4
SUMO3P55854 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.32□□□□□ -1.4
SUMO3P55854 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC6.32□□□□□ -1.4
SUMO3P55854 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
SUMO3P55854 ATP5BP1-201ENST00000411980 1574 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AC126474.2-201ENST00000623268 1750 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AC005261.2-201ENST00000593427 4258 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.31□□□□□ -1.4
SUMO3P55854 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SUMO3P55854 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.31□□□□□ -1.4
SUMO3P55854 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SUMO3P55854 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SUMO3P55854 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SUMO3P55854 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 OR10D1P-201ENST00000355343 936 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SUMO3P55854 RNU6-1000P-201ENST00000391066 106 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SUMO3P55854 AC024937.2-201ENST00000411669 1242 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.31□□□□□ -1.4
SUMO3P55854 PPIAP23-201ENST00000420099 497 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.31□□□□□ -1.4
SUMO3P55854 MTCYBP32-201ENST00000427945 1084 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 BX119321.1-201ENST00000428912 797 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AC018804.1-201ENST00000430381 618 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.31□□□□□ -1.4
SUMO3P55854 AL512661.1-201ENST00000434586 1253 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.31□□□□□ -1.4
SUMO3P55854 NMNAT1P3-201ENST00000457517 888 ntBASIC6.31□□□□□ -1.4
SUMO3P55854 CBX5P1-201ENST00000468470 561 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms