Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 Z95114.1-201ENST00000624264 14574 ntBASIC5.54□□□□□ -1.52
CDX1P47902 Z83820.1-201ENST00000456978 1499 ntBASIC5.54□□□□□ -1.52
CDX1P47902 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDX1P47902 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 RNA5SP429-201ENST00000363688 109 ntBASIC5.54□□□□□ -1.52
CDX1P47902 RNA5SP472-201ENST00000363868 119 ntBASIC5.54□□□□□ -1.52
CDX1P47902 SNORA70.5-201ENST00000365519 135 ntBASIC5.54□□□□□ -1.52
CDX1P47902 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDX1P47902 FAM204BP-201ENST00000369171 701 ntBASIC5.54□□□□□ -1.52
CDX1P47902 RNU11-201ENST00000387069 134 ntBASIC5.54□□□□□ -1.52
CDX1P47902 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.54□□□□□ -1.52
CDX1P47902 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDX1P47902 PUDPP2-201ENST00000431423 643 ntBASIC5.54□□□□□ -1.52
CDX1P47902 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 AL356133.1-201ENST00000444762 372 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.54□□□□□ -1.52
CDX1P47902 NUCKS1P1-201ENST00000452067 703 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AL354872.1-201ENST00000456361 967 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 AC117395.2-201ENST00000463122 1128 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC126615.1-201ENST00000470084 630 ntBASIC5.54□□□□□ -1.52
CDX1P47902 RPS16P9-201ENST00000477220 427 ntBASIC5.54□□□□□ -1.52
CDX1P47902 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.54□□□□□ -1.52
CDX1P47902 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC5.54□□□□□ -1.52
CDX1P47902 RPL10P7-201ENST00000495649 625 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.54□□□□□ -1.52
CDX1P47902 H3F3AP3-201ENST00000497682 407 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC146944.3-201ENST00000509969 371 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC017007.1-201ENST00000511960 415 ntBASIC5.54□□□□□ -1.52
CDX1P47902 DCAF13P2-201ENST00000514188 555 ntBASIC5.54□□□□□ -1.52
CDX1P47902 RNU2-45P-201ENST00000516068 187 ntBASIC5.54□□□□□ -1.52
CDX1P47902 RNA5SP278-201ENST00000517055 102 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.54□□□□□ -1.52
CDX1P47902 ST13P6-201ENST00000522430 1102 ntBASIC5.54□□□□□ -1.52
CDX1P47902 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 OR5M6P-201ENST00000530227 937 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AP000662.1-201ENST00000530952 487 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC078878.1-201ENST00000539832 958 ntBASIC5.54□□□□□ -1.52
CDX1P47902 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CDX1P47902 AC026458.1-201ENST00000564330 438 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC004232.2-201ENST00000574245 821 ntBASIC5.54□□□□□ -1.52
CDX1P47902 NPM1P45-201ENST00000583151 559 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.54□□□□□ -1.52
CDX1P47902 AL360012.1-201ENST00000602813 131 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC023513.1-201ENST00000604396 691 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.54□□□□□ -1.52
CDX1P47902 AC245407.2-201ENST00000614199 451 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AL157762.1-201ENST00000619612 415 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC087894.3-201ENST00000623682 349 ntBASIC5.54□□□□□ -1.52
CDX1P47902 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
CDX1P47902 AC232271.1-201ENST00000602455 2715 ntBASIC5.54□□□□□ -1.52
CDX1P47902 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CDX1P47902 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 PARP4P1-201ENST00000435945 2337 ntBASIC5.54□□□□□ -1.52
CDX1P47902 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDX1P47902 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.54□□□□□ -1.52
CDX1P47902 NLRP3P1-201ENST00000622303 1785 ntBASIC5.54□□□□□ -1.52
CDX1P47902 AC006511.3-201ENST00000624929 1783 ntBASIC5.54□□□□□ -1.52
CDX1P47902 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC5.54□□□□□ -1.52
CDX1P47902 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.54□□□□□ -1.52
CDX1P47902 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.54□□□□□ -1.52
CDX1P47902 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.54□□□□□ -1.52
CDX1P47902 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.54□□□□□ -1.52
CDX1P47902 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
CDX1P47902 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CDX1P47902 WDR95P-201ENST00000425638 1542 ntBASIC5.53□□□□□ -1.52
CDX1P47902 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CDX1P47902 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CDX1P47902 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.53□□□□□ -1.52
CDX1P47902 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CDX1P47902 AL136531.3-201ENST00000624378 3658 ntBASIC5.53□□□□□ -1.52
CDX1P47902 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.53□□□□□ -1.52
CDX1P47902 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CDX1P47902 MSL3P1-202ENST00000440028 1468 ntBASIC5.53□□□□□ -1.52
CDX1P47902 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDX1P47902 AL359263.1-201ENST00000441188 2796 ntBASIC5.53□□□□□ -1.52
CDX1P47902 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.53□□□□□ -1.52
CDX1P47902 RNU6-1017P-201ENST00000363613 106 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 331 ms