Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SNORD96A-201ENST00000606577 79 ntBASIC7.02□□□□□ -1.29
MTHFRP42898 MIR6729-201ENST00000618194 65 ntBASIC7.02□□□□□ -1.29
MTHFRP42898 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.02□□□□□ -1.29
MTHFRP42898 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
MTHFRP42898 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
MTHFRP42898 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
MTHFRP42898 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.02□□□□□ -1.29
MTHFRP42898 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
MTHFRP42898 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.02□□□□□ -1.29
MTHFRP42898 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
MTHFRP42898 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
MTHFRP42898 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
MTHFRP42898 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.02□□□□□ -1.29
MTHFRP42898 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
MTHFRP42898 AL121949.2-201ENST00000403446 1548 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
MTHFRP42898 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.01□□□□□ -1.29
MTHFRP42898 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.01□□□□□ -1.29
MTHFRP42898 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
MTHFRP42898 AC104966.1-201ENST00000467010 1464 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
MTHFRP42898 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
MTHFRP42898 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
MTHFRP42898 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 SNORA38B-201ENST00000363524 131 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 AL590762.1-201ENST00000391782 432 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.01□□□□□ -1.29
MTHFRP42898 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.01□□□□□ -1.29
MTHFRP42898 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.01□□□□□ -1.29
MTHFRP42898 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 GTF3AP6-201ENST00000432585 986 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.01□□□□□ -1.29
MTHFRP42898 HMGB1P7-201ENST00000450921 612 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.01□□□□□ -1.29
MTHFRP42898 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.01□□□□□ -1.29
MTHFRP42898 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.01□□□□□ -1.29
MTHFRP42898 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.01□□□□□ -1.29
MTHFRP42898 IGLVIV-64-201ENST00000518581 301 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.01□□□□□ -1.29
MTHFRP42898 OR7E158P-201ENST00000524483 910 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 CYCSP25-201ENST00000525280 316 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.01□□□□□ -1.29
MTHFRP42898 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.01□□□□□ -1.29
MTHFRP42898 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.01□□□□□ -1.29
MTHFRP42898 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 AC007066.2-202ENST00000566531 914 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.01□□□□□ -1.29
MTHFRP42898 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.01□□□□□ -1.29
MTHFRP42898 AC026898.1-201ENST00000586404 571 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 AC245052.7-201ENST00000601161 359 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 AC093635.1-201ENST00000609028 555 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.01□□□□□ -1.29
MTHFRP42898 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.01□□□□□ -1.29
MTHFRP42898 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.01□□□□□ -1.29
MTHFRP42898 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.01□□□□□ -1.29
MTHFRP42898 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
MTHFRP42898 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.01□□□□□ -1.29
MTHFRP42898 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.01□□□□□ -1.29
MTHFRP42898 AC092821.3-202ENST00000641304 2767 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.01□□□□□ -1.29
MTHFRP42898 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MTHFRP42898 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.01□□□□□ -1.29
MTHFRP42898 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.01□□□□□ -1.29
MTHFRP42898 PSMC1P6-201ENST00000477233 1319 ntBASIC7.01□□□□□ -1.29
MTHFRP42898 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7□□□□□ -1.29
MTHFRP42898 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7□□□□□ -1.29
MTHFRP42898 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7□□□□□ -1.29
MTHFRP42898 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
MTHFRP42898 AC020658.2-201ENST00000559030 4020 ntBASIC7□□□□□ -1.29
MTHFRP42898 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
MTHFRP42898 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7□□□□□ -1.29
MTHFRP42898 AC090220.1-201ENST00000593078 1699 ntBASIC7□□□□□ -1.29
MTHFRP42898 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
MTHFRP42898 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7□□□□□ -1.29
MTHFRP42898 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7□□□□□ -1.29
MTHFRP42898 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7□□□□□ -1.29
MTHFRP42898 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7□□□□□ -1.29
MTHFRP42898 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
MTHFRP42898 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms