Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.09□□□□□ -1.43
RFC3P40938 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RFC3P40938 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RFC3P40938 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.09□□□□□ -1.43
RFC3P40938 PSMC1P4-201ENST00000515236 1327 ntBASIC6.09□□□□□ -1.43
RFC3P40938 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.09□□□□□ -1.43
RFC3P40938 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 PPIAP24-201ENST00000328558 471 ntBASIC6.09□□□□□ -1.43
RFC3P40938 RNA5SP65-201ENST00000363166 119 ntBASIC6.09□□□□□ -1.43
RFC3P40938 RNA5SP232-201ENST00000364144 119 ntBASIC6.09□□□□□ -1.43
RFC3P40938 SNORA70.3-201ENST00000365075 132 ntBASIC6.09□□□□□ -1.43
RFC3P40938 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RFC3P40938 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 RN7SKP129-201ENST00000410288 299 ntBASIC6.09□□□□□ -1.43
RFC3P40938 RANP6-201ENST00000413691 644 ntBASIC6.09□□□□□ -1.43
RFC3P40938 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.09□□□□□ -1.43
RFC3P40938 THEM7P-201ENST00000419556 672 ntBASIC6.09□□□□□ -1.43
RFC3P40938 AL139158.1-201ENST00000424719 340 ntBASIC6.09□□□□□ -1.43
RFC3P40938 AC239367.3-201ENST00000428996 814 ntBASIC6.09□□□□□ -1.43
RFC3P40938 PCNPP2-201ENST00000441651 455 ntBASIC6.09□□□□□ -1.43
RFC3P40938 EEF1B2P3-201ENST00000447718 678 ntBASIC6.09□□□□□ -1.43
RFC3P40938 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.09□□□□□ -1.43
RFC3P40938 PABPC1P1-201ENST00000506347 591 ntBASIC6.09□□□□□ -1.43
RFC3P40938 AL390198.2-201ENST00000510553 222 ntBASIC6.09□□□□□ -1.43
RFC3P40938 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.09□□□□□ -1.43
RFC3P40938 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.09□□□□□ -1.43
RFC3P40938 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RFC3P40938 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.09□□□□□ -1.43
RFC3P40938 ANP32BP1-202ENST00000568553 737 ntBASIC6.09□□□□□ -1.43
RFC3P40938 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.09□□□□□ -1.43
RFC3P40938 PCA3_2.1-201ENST00000612507 409 ntBASIC6.09□□□□□ -1.43
RFC3P40938 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.09□□□□□ -1.43
RFC3P40938 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.09□□□□□ -1.43
RFC3P40938 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.09□□□□□ -1.43
RFC3P40938 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.09□□□□□ -1.43
RFC3P40938 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 AC007114.2-201ENST00000576014 4281 ntBASIC6.09□□□□□ -1.43
RFC3P40938 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.09□□□□□ -1.44
RFC3P40938 AP002833.3-201ENST00000625075 2265 ntBASIC6.09□□□□□ -1.44
RFC3P40938 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RFC3P40938 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.08□□□□□ -1.44
RFC3P40938 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.08□□□□□ -1.44
RFC3P40938 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RFC3P40938 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 SNORA38B-201ENST00000363524 131 ntBASIC6.08□□□□□ -1.44
RFC3P40938 RAB5CP1-201ENST00000395972 580 ntBASIC6.08□□□□□ -1.44
RFC3P40938 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.08□□□□□ -1.44
RFC3P40938 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.08□□□□□ -1.44
RFC3P40938 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.08□□□□□ -1.44
RFC3P40938 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.08□□□□□ -1.44
RFC3P40938 CT45A11P-201ENST00000448043 1134 ntBASIC6.08□□□□□ -1.44
RFC3P40938 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.08□□□□□ -1.44
RFC3P40938 RN7SL168P-201ENST00000463821 279 ntBASIC6.08□□□□□ -1.44
RFC3P40938 AC104339.1-201ENST00000465478 348 ntBASIC6.08□□□□□ -1.44
RFC3P40938 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.08□□□□□ -1.44
RFC3P40938 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RFC3P40938 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.08□□□□□ -1.44
RFC3P40938 AC024405.1-201ENST00000532521 1042 ntBASIC6.08□□□□□ -1.44
RFC3P40938 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.08□□□□□ -1.44
RFC3P40938 AC025283.1-201ENST00000572039 734 ntBASIC6.08□□□□□ -1.44
RFC3P40938 AC063977.7-201ENST00000594454 337 ntBASIC6.08□□□□□ -1.44
RFC3P40938 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.08□□□□□ -1.44
RFC3P40938 AC091133.5-201ENST00000603088 301 ntBASIC6.08□□□□□ -1.44
RFC3P40938 AC012676.3-201ENST00000614983 479 ntBASIC6.08□□□□□ -1.44
RFC3P40938 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.08□□□□□ -1.44
RFC3P40938 AC021422.1-201ENST00000621212 473 ntBASIC6.08□□□□□ -1.44
RFC3P40938 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.08□□□□□ -1.44
RFC3P40938 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RFC3P40938 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.08□□□□□ -1.44
RFC3P40938 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC3P40938 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.08□□□□□ -1.44
RFC3P40938 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RFC3P40938 AC007993.1-201ENST00000621298 2430 ntBASIC6.08□□□□□ -1.44
RFC3P40938 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.08□□□□□ -1.44
RFC3P40938 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.08□□□□□ -1.44
RFC3P40938 AC079949.2-201ENST00000617117 2933 ntBASIC6.08□□□□□ -1.44
RFC3P40938 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RFC3P40938 AC093278.2-201ENST00000564956 2485 ntBASIC6.07□□□□□ -1.44
RFC3P40938 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.07□□□□□ -1.44
RFC3P40938 AC004014.2-201ENST00000623718 5122 ntBASIC6.07□□□□□ -1.44
RFC3P40938 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms