Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AP003084.1-201ENST00000524828 742 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 AP001120.4-201ENST00000590231 108 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC024255.1-201ENST00000614376 102 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 SNORA16A-202ENST00000628458 135 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC016745.2-201ENST00000608834 3443 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DMAP28067 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 GTF2IP4-201ENST00000453092 2054 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DMAP28067 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DMAP28067 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DMAP28067 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 AL096800.1-201ENST00000405326 893 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 AL034372.1-201ENST00000407586 754 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 IFNA12P-201ENST00000413147 571 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 AF274573.1-201ENST00000430535 494 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 MYL6P3-201ENST00000436904 432 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 DBIL5P2-201ENST00000443827 253 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 RPL7L1P3-201ENST00000455249 689 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 AP001803.1-201ENST00000525668 147 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 OR5M4P-201ENST00000529436 925 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 OR7E161P-201ENST00000533722 967 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 BOLA2P1-201ENST00000584794 232 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC011447.2-201ENST00000592921 283 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC002069.2-201ENST00000603580 883 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC007262.1-201ENST00000604099 321 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC241377.1-201ENST00000619797 406 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 AC087894.3-201ENST00000623682 349 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 AP000550.3-201ENST00000637734 379 ntBASIC5.59□□□□□ -1.51
HLA-DMAP28067 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DMAP28067 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DMAP28067 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DMAP28067 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DMAP28067 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HLA-DMAP28067 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HLA-DMAP28067 AOX3P-204ENST00000491025 2107 ntBASIC5.59□□□□□ -1.52
HLA-DMAP28067 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.59□□□□□ -1.52
HLA-DMAP28067 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
HLA-DMAP28067 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.59□□□□□ -1.52
HLA-DMAP28067 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.59□□□□□ -1.52
HLA-DMAP28067 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.59□□□□□ -1.52
HLA-DMAP28067 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DMAP28067 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DMAP28067 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DMAP28067 DNM1P47-203ENST00000571780 12667 ntBASIC5.58□□□□□ -1.52
HLA-DMAP28067 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DMAP28067 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DMAP28067 USP9YP3-201ENST00000434481 1766 ntBASIC5.58□□□□□ -1.52
HLA-DMAP28067 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DMAP28067 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DMAP28067 AC092692.1-201ENST00000623625 2595 ntBASIC5.58□□□□□ -1.52
HLA-DMAP28067 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DMAP28067 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DMAP28067 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DMAP28067 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DMAP28067 RNA5SP302-201ENST00000364896 100 ntBASIC5.58□□□□□ -1.52
HLA-DMAP28067 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
HLA-DMAP28067 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DMAP28067 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DMAP28067 AC090114.1-201ENST00000393266 448 ntBASIC5.58□□□□□ -1.52
HLA-DMAP28067 NACAP7-201ENST00000407371 609 ntBASIC5.58□□□□□ -1.52
HLA-DMAP28067 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DMAP28067 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms