Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH3P22223 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.55□□□□□ -1.36
CDH3P22223 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH3P22223 AC015818.6-201ENST00000584274 634 ntBASIC6.55□□□□□ -1.36
CDH3P22223 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH3P22223 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 AC018659.2-201ENST00000624690 715 ntBASIC6.55□□□□□ -1.36
CDH3P22223 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH3P22223 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH3P22223 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH3P22223 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.55□□□□□ -1.36
CDH3P22223 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CDH3P22223 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.55□□□□□ -1.36
CDH3P22223 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CDH3P22223 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH3P22223 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH3P22223 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH3P22223 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CDH3P22223 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH3P22223 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CDH3P22223 RBPJP6-201ENST00000411556 1431 ntBASIC6.54□□□□□ -1.36
CDH3P22223 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH3P22223 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH3P22223 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CDH3P22223 RNA5SP333-201ENST00000363466 118 ntBASIC6.54□□□□□ -1.36
CDH3P22223 RNA5SP334-201ENST00000364825 118 ntBASIC6.54□□□□□ -1.36
CDH3P22223 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH3P22223 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH3P22223 SNORA7A-201ENST00000384765 139 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AC019178.1-201ENST00000392337 440 ntBASIC6.54□□□□□ -1.36
CDH3P22223 UBBP1-201ENST00000392399 473 ntBASIC6.54□□□□□ -1.36
CDH3P22223 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.54□□□□□ -1.36
CDH3P22223 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH3P22223 CDC42P6-201ENST00000421246 576 ntBASIC6.54□□□□□ -1.36
CDH3P22223 DUTP4-201ENST00000424782 475 ntBASIC6.54□□□□□ -1.36
CDH3P22223 RPS10P21-201ENST00000430654 475 ntBASIC6.54□□□□□ -1.36
CDH3P22223 PFN1P11-201ENST00000445829 389 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AP003385.3-201ENST00000472498 287 ntBASIC6.54□□□□□ -1.36
CDH3P22223 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 RN7SL382P-201ENST00000482631 282 ntBASIC6.54□□□□□ -1.36
CDH3P22223 SNRPCP11-201ENST00000492453 205 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.54□□□□□ -1.36
CDH3P22223 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.54□□□□□ -1.36
CDH3P22223 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CDH3P22223 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 AC140063.1-201ENST00000541343 259 ntBASIC6.54□□□□□ -1.36
CDH3P22223 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.54□□□□□ -1.36
CDH3P22223 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH3P22223 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.54□□□□□ -1.36
CDH3P22223 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH3P22223 GTF2IP6-201ENST00000583143 541 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH3P22223 RPL7AP69-201ENST00000595306 806 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AL390877.1-201ENST00000605704 214 ntBASIC6.54□□□□□ -1.36
CDH3P22223 MIR6885-201ENST00000612241 66 ntBASIC6.54□□□□□ -1.36
CDH3P22223 HTR1DP1-201ENST00000616500 888 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AP001885.1-201ENST00000621658 558 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AC006328.2-201ENST00000623198 397 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AC005514.1-201ENST00000623521 208 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AC012005.2-201ENST00000624333 397 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AC009950.2-201ENST00000636548 183 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AC007603.3-201ENST00000636915 979 ntBASIC6.54□□□□□ -1.36
CDH3P22223 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH3P22223 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 AC020978.6-201ENST00000571197 3177 ntBASIC6.54□□□□□ -1.36
CDH3P22223 AC010132.4-201ENST00000569883 1368 ntBASIC6.54□□□□□ -1.36
CDH3P22223 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH3P22223 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 USP9YP3-201ENST00000434481 1766 ntBASIC6.54□□□□□ -1.36
CDH3P22223 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH3P22223 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH3P22223 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH3P22223 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CDH3P22223 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CDH3P22223 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH3P22223 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms