Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.12□□□□□ -1.27
TPM1P09493 RPS21P1-201ENST00000434479 247 ntBASIC7.12□□□□□ -1.27
TPM1P09493 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
TPM1P09493 PRELID1P3-201ENST00000450055 643 ntBASIC7.12□□□□□ -1.27
TPM1P09493 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.12□□□□□ -1.27
TPM1P09493 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.12□□□□□ -1.27
TPM1P09493 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.12□□□□□ -1.27
TPM1P09493 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.12□□□□□ -1.27
TPM1P09493 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.12□□□□□ -1.27
TPM1P09493 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.12□□□□□ -1.27
TPM1P09493 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.12□□□□□ -1.27
TPM1P09493 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.12□□□□□ -1.27
TPM1P09493 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.12□□□□□ -1.27
TPM1P09493 OR4C1P-201ENST00000530880 937 ntBASIC7.12□□□□□ -1.27
TPM1P09493 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.12□□□□□ -1.27
TPM1P09493 ANP32BP1-202ENST00000568553 737 ntBASIC7.12□□□□□ -1.27
TPM1P09493 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.12□□□□□ -1.27
TPM1P09493 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.12□□□□□ -1.27
TPM1P09493 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.12□□□□□ -1.27
TPM1P09493 AC009120.7-201ENST00000623452 780 ntBASIC7.12□□□□□ -1.27
TPM1P09493 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.12□□□□□ -1.27
TPM1P09493 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.12□□□□□ -1.27
TPM1P09493 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.12□□□□□ -1.27
TPM1P09493 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
TPM1P09493 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.12□□□□□ -1.27
TPM1P09493 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.12□□□□□ -1.27
TPM1P09493 SHQ1P1-201ENST00000437111 1544 ntBASIC7.11□□□□□ -1.27
TPM1P09493 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.11□□□□□ -1.27
TPM1P09493 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
TPM1P09493 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.11□□□□□ -1.27
TPM1P09493 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TPM1P09493 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
TPM1P09493 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.11□□□□□ -1.27
TPM1P09493 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
TPM1P09493 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TPM1P09493 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TPM1P09493 RNU11-201ENST00000387069 134 ntBASIC7.11□□□□□ -1.27
TPM1P09493 UBBP1-201ENST00000392399 473 ntBASIC7.11□□□□□ -1.27
TPM1P09493 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TPM1P09493 PDCL3P5-201ENST00000398028 722 ntBASIC7.11□□□□□ -1.27
TPM1P09493 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TPM1P09493 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
TPM1P09493 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TPM1P09493 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC7.11□□□□□ -1.27
TPM1P09493 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM1P09493 AC009237.1-201ENST00000442127 744 ntBASIC7.11□□□□□ -1.27
TPM1P09493 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.11□□□□□ -1.27
TPM1P09493 REG1CP-206ENST00000447469 496 ntBASIC7.11□□□□□ -1.27
TPM1P09493 RPL26P30-201ENST00000453533 435 ntBASIC7.11□□□□□ -1.27
TPM1P09493 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
TPM1P09493 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.11□□□□□ -1.27
TPM1P09493 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM1P09493 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM1P09493 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM1P09493 AL390198.2-201ENST00000510553 222 ntBASIC7.11□□□□□ -1.27
TPM1P09493 AP001646.2-201ENST00000528645 1156 ntBASIC7.11□□□□□ -1.27
TPM1P09493 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM1P09493 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.11□□□□□ -1.27
TPM1P09493 CIPC-206ENST00000555611 599 ntTSL 4 BASIC7.11□□□□□ -1.27
TPM1P09493 FRG2IP-201ENST00000563581 781 ntBASIC7.11□□□□□ -1.27
TPM1P09493 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.11□□□□□ -1.27
TPM1P09493 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TPM1P09493 SETP3-201ENST00000581726 813 ntBASIC7.11□□□□□ -1.27
TPM1P09493 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM1P09493 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM1P09493 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.11□□□□□ -1.27
TPM1P09493 AL360012.1-201ENST00000602813 131 ntBASIC7.11□□□□□ -1.27
TPM1P09493 DIMT1P1-201ENST00000603970 763 ntBASIC7.11□□□□□ -1.27
TPM1P09493 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TPM1P09493 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TPM1P09493 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TPM1P09493 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
TPM1P09493 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
TPM1P09493 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TPM1P09493 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
TPM1P09493 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
TPM1P09493 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.11□□□□□ -1.27
TPM1P09493 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.11□□□□□ -1.27
TPM1P09493 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TPM1P09493 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
TPM1P09493 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM1P09493 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM1P09493 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 AC011455.2-201ENST00000599320 3336 ntBASIC7.1□□□□□ -1.27
TPM1P09493 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.1□□□□□ -1.27
TPM1P09493 RNA5SP176-201ENST00000390956 110 ntBASIC7.1□□□□□ -1.27
TPM1P09493 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms