Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZIC3O60481 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ZIC3O60481 RNU6-891P-201ENST00000384280 111 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 MIR191-201ENST00000384873 92 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 MIR640-201ENST00000385086 96 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 VIM2P-201ENST00000402383 1294 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 RN7SKP188-201ENST00000410789 317 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.97□□□□□ -1.45
ZIC3O60481 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.97□□□□□ -1.45
ZIC3O60481 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.97□□□□□ -1.45
ZIC3O60481 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.97□□□□□ -1.45
ZIC3O60481 OR6R1P-201ENST00000431838 940 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AC013403.1-201ENST00000436954 263 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.97□□□□□ -1.45
ZIC3O60481 AC092601.1-201ENST00000444526 383 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 CCNJP1-201ENST00000450600 1149 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AC004890.1-201ENST00000461005 181 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 COL6A4P2-205ENST00000509855 506 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AC138517.1-201ENST00000515724 568 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.97□□□□□ -1.45
ZIC3O60481 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.97□□□□□ -1.45
ZIC3O60481 BTG1P1-201ENST00000540396 508 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.97□□□□□ -1.45
ZIC3O60481 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.97□□□□□ -1.45
ZIC3O60481 AL162632.2-201ENST00000553933 399 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.97□□□□□ -1.45
ZIC3O60481 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.97□□□□□ -1.45
ZIC3O60481 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.97□□□□□ -1.45
ZIC3O60481 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.97□□□□□ -1.45
ZIC3O60481 AC092574.1-201ENST00000609771 420 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AC018692.2-201ENST00000624130 348 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AC114546.4-201ENST00000624413 369 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 HPVC1-201ENST00000629899 1198 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AC091948.2-201ENST00000636510 279 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AC132825.8-201ENST00000640783 297 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 AL139254.3-201ENST00000641097 674 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 MAPK10-383ENST00000642032 3390 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZIC3O60481 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZIC3O60481 AC007012.2-201ENST00000623206 1676 ntBASIC5.97□□□□□ -1.45
ZIC3O60481 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZIC3O60481 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZIC3O60481 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZIC3O60481 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZIC3O60481 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ZIC3O60481 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.97□□□□□ -1.45
ZIC3O60481 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC5.97□□□□□ -1.45
ZIC3O60481 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ZIC3O60481 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
ZIC3O60481 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ZIC3O60481 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
ZIC3O60481 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
ZIC3O60481 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
ZIC3O60481 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
ZIC3O60481 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
ZIC3O60481 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ZIC3O60481 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
ZIC3O60481 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC5.96□□□□□ -1.46
ZIC3O60481 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.96□□□□□ -1.46
ZIC3O60481 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ZIC3O60481 AL133260.1-201ENST00000405720 405 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 MRPS21P5-201ENST00000417885 231 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.96□□□□□ -1.46
ZIC3O60481 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
ZIC3O60481 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.96□□□□□ -1.46
ZIC3O60481 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.96□□□□□ -1.46
ZIC3O60481 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.96□□□□□ -1.46
ZIC3O60481 AL020997.1-201ENST00000446554 349 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.96□□□□□ -1.46
ZIC3O60481 YRDCP3-201ENST00000456507 480 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 RBMY2HP-201ENST00000457961 720 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 HMGN1P8-201ENST00000463578 288 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 RN7SL413P-201ENST00000482700 297 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 RPL9P15-201ENST00000491096 532 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.96□□□□□ -1.46
ZIC3O60481 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.96□□□□□ -1.46
ZIC3O60481 AC083906.1-201ENST00000509298 406 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 AC026688.1-201ENST00000520639 1168 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.96□□□□□ -1.46
ZIC3O60481 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.96□□□□□ -1.46
ZIC3O60481 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.96□□□□□ -1.46
ZIC3O60481 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ZIC3O60481 AL731537.2-201ENST00000561565 951 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.96□□□□□ -1.46
ZIC3O60481 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.96□□□□□ -1.46
ZIC3O60481 AC013731.1-201ENST00000604340 883 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 RPL21P136-201ENST00000605378 396 ntBASIC5.96□□□□□ -1.46
ZIC3O60481 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms