Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 IGKV3D-25-201ENST00000519599 235 ntBASIC9.46□□□□□ -0.9
HFM1A2PYH4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 AC027229.1-201ENST00000583887 253 ntBASIC9.46□□□□□ -0.9
HFM1A2PYH4 AC124916.2-201ENST00000604416 224 ntBASIC9.46□□□□□ -0.9
HFM1A2PYH4 AL365181.4-201ENST00000609800 547 ntBASIC9.46□□□□□ -0.9
HFM1A2PYH4 AC010998.3-201ENST00000613871 631 ntBASIC9.46□□□□□ -0.9
HFM1A2PYH4 UOX-205ENST00000640983 544 ntTSL 4 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
HFM1A2PYH4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
HFM1A2PYH4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
HFM1A2PYH4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
HFM1A2PYH4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
HFM1A2PYH4 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
HFM1A2PYH4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
HFM1A2PYH4 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 CDY5P-201ENST00000411487 1580 ntBASIC9.45□□□□□ -0.9
HFM1A2PYH4 CDY9P-201ENST00000451397 1580 ntBASIC9.45□□□□□ -0.9
HFM1A2PYH4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
HFM1A2PYH4 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
HFM1A2PYH4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
HFM1A2PYH4 AC008171.1-201ENST00000395058 200 ntBASIC9.45□□□□□ -0.9
HFM1A2PYH4 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
HFM1A2PYH4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 RPS29P14-201ENST00000431518 171 ntBASIC9.45□□□□□ -0.9
HFM1A2PYH4 RPL5P7-201ENST00000444235 813 ntBASIC9.45□□□□□ -0.9
HFM1A2PYH4 AC094085.1-201ENST00000468914 584 ntBASIC9.45□□□□□ -0.9
HFM1A2PYH4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 AC073916.1-201ENST00000545095 130 ntBASIC9.45□□□□□ -0.9
HFM1A2PYH4 AC002519.2-203ENST00000567043 837 ntBASIC9.45□□□□□ -0.9
HFM1A2PYH4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
HFM1A2PYH4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 AL445649.1-201ENST00000615941 691 ntBASIC9.45□□□□□ -0.9
HFM1A2PYH4 AC073488.6-201ENST00000632293 754 ntBASIC9.45□□□□□ -0.9
HFM1A2PYH4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
HFM1A2PYH4 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.45□□□□□ -0.9
HFM1A2PYH4 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
HFM1A2PYH4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
HFM1A2PYH4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
HFM1A2PYH4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 PARP4P1-201ENST00000435945 2337 ntBASIC9.44□□□□□ -0.9
HFM1A2PYH4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
HFM1A2PYH4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
HFM1A2PYH4 AC242426.1-201ENST00000435270 960 ntBASIC9.44□□□□□ -0.9
HFM1A2PYH4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
HFM1A2PYH4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 MTND6P8-201ENST00000503471 522 ntBASIC9.44□□□□□ -0.9
HFM1A2PYH4 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 MIR3189-201ENST00000578735 73 ntBASIC9.44□□□□□ -0.9
HFM1A2PYH4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
HFM1A2PYH4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
HFM1A2PYH4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
HFM1A2PYH4 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC9.44□□□□□ -0.9
HFM1A2PYH4 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
HFM1A2PYH4 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
HFM1A2PYH4 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
HFM1A2PYH4 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
HFM1A2PYH4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
HFM1A2PYH4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 PNKDP1-201ENST00000435914 430 ntBASIC9.43□□□□□ -0.9
HFM1A2PYH4 RN7SL254P-201ENST00000460609 284 ntBASIC9.43□□□□□ -0.9
HFM1A2PYH4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 IGKV3D-34-201ENST00000522638 302 ntBASIC9.43□□□□□ -0.9
HFM1A2PYH4 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 BX323046.1-201ENST00000610145 535 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms