Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SNORA11.6-201ENST00000619030 128 ntBASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 AC061999.1-201ENST00000624454 177 ntBASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 AL354702.2-202ENST00000641481 890 ntBASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 AL136531.3-201ENST00000624378 3658 ntBASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA1Q9UND3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 CLCA3P-203ENST00000490028 2781 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 RNA5SP232-201ENST00000364144 119 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AL139158.1-201ENST00000424719 340 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 OR6R1P-201ENST00000431838 940 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AL645939.3-201ENST00000435408 225 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC118758.1-202ENST00000454719 225 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 RN7SL413P-201ENST00000482700 297 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC015818.6-201ENST00000584274 634 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC012676.3-201ENST00000614983 479 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 uc_338.29-201ENST00000615099 168 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AC120057.5-201ENST00000623840 154 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AP003486.1-201ENST00000525716 3994 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 MAPK10-323ENST00000641493 3207 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 CUBNP3-201ENST00000457461 1784 ntBASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
NPIPA1Q9UND3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 RNA5SP321-201ENST00000362722 111 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 RN7SKP188-201ENST00000410789 317 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC092106.2-201ENST00000436597 487 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 BRAFP1-201ENST00000445336 2703 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 RPL7AP23-201ENST00000482625 776 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 RPS27P20-201ENST00000492051 246 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC110597.1-201ENST00000562669 3176 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 MIR3154-201ENST00000577829 84 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms