Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 MFSD8-256ENST00000641949 1640 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC009120.2-204ENST00000621548 2032 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AL604028.2-201ENST00000437848 788 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC009237.4-201ENST00000441078 238 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 OR52Y1P-201ENST00000452418 828 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 RN7SL392P-201ENST00000473024 299 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC122714.1-201ENST00000502510 459 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC022826.1-201ENST00000519383 805 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 OR4A42P-201ENST00000531397 938 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC068790.1-201ENST00000536166 355 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC092375.1-201ENST00000550410 637 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC093510.2-201ENST00000562820 896 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC018558.5-201ENST00000565840 952 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC133794.1-201ENST00000602731 914 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AL158050.2-201ENST00000605336 568 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AC012640.3-201ENST00000607847 430 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 FRG2MP-201ENST00000613317 856 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 OR1N1-202ENST00000619659 939 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 OR4G3P-201ENST00000633500 913 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 AL445984.1-201ENST00000637834 659 ntBASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AMBRA1Q9C0C7 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 AC034229.2-201ENST00000566945 2508 ntBASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 RNU11-6P-201ENST00000391127 133 ntBASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 CCNB2P1-201ENST00000399411 1150 ntBASIC6.43□□□□□ -1.38
AMBRA1Q9C0C7 AL139100.1-201ENST00000408001 498 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms