Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-CQ95604 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-CQ95604 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-CQ95604 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-CQ95604 AC060780.3-201ENST00000589464 80 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-CQ95604 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 OR10H3-202ENST00000641646 1029 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
HLA-CQ95604 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
HLA-CQ95604 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 ERG-204ENST00000398907 4809 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-CQ95604 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 MITF-209ENST00000448226 2489 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 TUBB-205ENST00000327892 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 SIAH1-201ENST00000356721 2415 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 MAPK6PS3-201ENST00000403865 2162 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
HLA-CQ95604 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
HLA-CQ95604 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-CQ95604 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-CQ95604 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 AL078621.1-201ENST00000272567 768 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
HLA-CQ95604 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
HLA-CQ95604 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
HLA-CQ95604 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 RNA5SP463-201ENST00000363030 120 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 RMRP-202ENST00000363046 264 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 Y_RNA.302-201ENST00000364997 102 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
HLA-CQ95604 RPL7-203ENST00000396466 762 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 RPL17P12-201ENST00000413391 526 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 YWHAZP2-201ENST00000440317 728 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-CQ95604 PCNPP2-201ENST00000441651 455 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
HLA-CQ95604 XACT-201ENST00000468762 497 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-CQ95604 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 RPL3P10-201ENST00000476002 1164 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 AC013828.1-201ENST00000481845 158 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 ACTG1P13-201ENST00000486987 1043 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.6□□□□□ -1.03
HLA-CQ95604 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-CQ95604 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AC092747.2-201ENST00000545069 983 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.6□□□□□ -1.03
HLA-CQ95604 BMS1P15-201ENST00000554269 1141 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-CQ95604 NPM1P5-201ENST00000557228 838 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AL133457.1-201ENST00000564251 987 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-CQ95604 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 AC020910.2-201ENST00000603635 610 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 AL109936.2-201ENST00000605350 650 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 AL592295.2-201ENST00000612578 206 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 MESTIT1_2.1-201ENST00000616328 235 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 LINC02028-221ENST00000622169 621 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-CQ95604 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AF001550.2-201ENST00000636643 217 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 HIPK1-206ENST00000369559 3424 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-CQ95604 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms