Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AKAP17BP-201ENST00000431706 2719 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF806-201ENST00000438300 1774 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 RNU12-2P-201ENST00000364789 156 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AC003989.1-201ENST00000434569 565 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AC009518.3-201ENST00000438972 253 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 DBIL5P2-201ENST00000443827 253 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 RPL7P14-201ENST00000449851 741 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AL096803.1-201ENST00000456921 1021 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AC008620.1-201ENST00000468453 592 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 RN7SL685P-201ENST00000476271 298 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 RPL7AP56-201ENST00000476420 791 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 RN7SL282P-201ENST00000479676 297 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 RPL7AP23-201ENST00000482625 776 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 NDUFA3P2-201ENST00000531434 232 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 CARSP1-201ENST00000603171 889 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AL590032.1-201ENST00000604920 252 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 U1.41-201ENST00000617626 165 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AC021422.1-201ENST00000621212 473 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AL162377.2-201ENST00000624532 337 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AL512353.3-201ENST00000417517 1326 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AC099654.3-201ENST00000447087 1546 ntBASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AC011504.1-201ENST00000623331 4103 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AC011815.2-201ENST00000618230 2021 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 RNA5SP114-201ENST00000363780 113 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 RNU1-59P-201ENST00000364829 162 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 U3.14-201ENST00000365363 227 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AC134879.1-201ENST00000426062 394 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 RPL29P7-201ENST00000440227 457 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AC079922.1-201ENST00000443291 359 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 DNAJC19P5-201ENST00000443295 316 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 RPL23AP28-201ENST00000448062 470 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AC019080.2-201ENST00000453859 394 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 NPM1P21-201ENST00000513394 762 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 MTCYBP44-201ENST00000514835 823 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 RN7SL25P-201ENST00000583862 260 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 BOLA2P1-201ENST00000584794 232 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 U1.25-201ENST00000614085 162 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 U1.34-201ENST00000618578 162 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 U1.31-201ENST00000620022 160 ntBASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC71LQ8N9Z2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms