Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC096661.1-201ENST00000515870 822 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 DEFB108A-201ENST00000530110 222 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 ILF2P2-201ENST00000547482 1117 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 CYP4A44P-201ENST00000569984 154 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC233702.4-201ENST00000581610 304 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 LINC00635-210ENST00000600240 714 ntTSL 5 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL122127.1-201ENST00000603832 327 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 IMMP1LP1-201ENST00000605170 488 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL022345.3-201ENST00000611406 228 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC091304.9-201ENST00000612091 226 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC011472.4-201ENST00000615848 491 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC006840.1-201ENST00000623069 542 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 U6.107-201ENST00000637108 79 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.84□□□□□ -1.16
DEPDC4Q8N2C3 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
DEPDC4Q8N2C3 FANCB-202ENST00000398334 3008 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
DEPDC4Q8N2C3 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC100871.1-201ENST00000507871 1456 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 OR9G4-201ENST00000302957 984 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 OR9K2-201ENST00000305377 1122 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 FAM204BP-201ENST00000369171 701 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AL031864.1-201ENST00000392075 423 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 CYCSP45-201ENST00000402289 315 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 RN7SKP56-201ENST00000410513 331 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 NPM1P4-201ENST00000414095 812 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC106017.1-202ENST00000424109 428 ntTSL 5 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC009501.2-201ENST00000428700 312 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 RPL31P54-201ENST00000429803 370 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC007952.3-202ENST00000435028 428 ntTSL 5 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 MTND1P28-201ENST00000435623 950 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AL512286.1-201ENST00000439244 400 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 MTCO3P18-201ENST00000440206 761 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AP000532.1-201ENST00000440999 177 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC112653.1-201ENST00000443851 386 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 OR6C5P-201ENST00000452388 923 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 RPS12P20-201ENST00000464109 380 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 RPL34P34-201ENST00000465389 354 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC114786.3-201ENST00000509304 705 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 RNU6-718P-201ENST00000516166 105 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC027698.1-201ENST00000518536 625 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 IGHV3-32-201ENST00000519182 355 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 OR4R3P-201ENST00000525084 838 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 RAB19-203ENST00000537763 952 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 LINC01572-203ENST00000563823 563 ntTSL 4 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 snoZ6.4-201ENST00000581669 55 ntBASIC7.83□□□□□ -1.16
DEPDC4Q8N2C3 AP005262.1-201ENST00000582646 997 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms