Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
SKP1P63208 CLCA3P-203ENST00000490028 2781 ntBASIC6.3□□□□□ -1.4
SKP1P63208 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 AL139384.2-201ENST00000613809 3590 ntBASIC6.3□□□□□ -1.4
SKP1P63208 MAPK10-383ENST00000642032 3390 ntBASIC6.3□□□□□ -1.4
SKP1P63208 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 AL033519.1-201ENST00000407266 307 ntBASIC6.3□□□□□ -1.4
SKP1P63208 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.3□□□□□ -1.4
SKP1P63208 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.3□□□□□ -1.4
SKP1P63208 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.3□□□□□ -1.4
SKP1P63208 AL022324.2-201ENST00000434827 780 ntBASIC6.3□□□□□ -1.4
SKP1P63208 RPEP4-201ENST00000437636 602 ntBASIC6.3□□□□□ -1.4
SKP1P63208 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.3□□□□□ -1.4
SKP1P63208 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.3□□□□□ -1.4
SKP1P63208 RPS18P1-201ENST00000447840 458 ntBASIC6.3□□□□□ -1.4
SKP1P63208 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.3□□□□□ -1.4
SKP1P63208 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.3□□□□□ -1.4
SKP1P63208 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.3□□□□□ -1.4
SKP1P63208 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.3□□□□□ -1.4
SKP1P63208 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.3□□□□□ -1.4
SKP1P63208 IGLV3-6-201ENST00000523937 250 ntBASIC6.3□□□□□ -1.4
SKP1P63208 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.3□□□□□ -1.4
SKP1P63208 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.3□□□□□ -1.4
SKP1P63208 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.3□□□□□ -1.4
SKP1P63208 AC005519.1-201ENST00000554490 601 ntBASIC6.3□□□□□ -1.4
SKP1P63208 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.3□□□□□ -1.4
SKP1P63208 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.3□□□□□ -1.4
SKP1P63208 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.3□□□□□ -1.4
SKP1P63208 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.3□□□□□ -1.4
SKP1P63208 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.3□□□□□ -1.4
SKP1P63208 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.3□□□□□ -1.4
SKP1P63208 RAB28P4-201ENST00000622233 665 ntBASIC6.3□□□□□ -1.4
SKP1P63208 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.3□□□□□ -1.4
SKP1P63208 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SKP1P63208 AL449283.1-201ENST00000602631 3403 ntBASIC6.3□□□□□ -1.4
SKP1P63208 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.3□□□□□ -1.4
SKP1P63208 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.3□□□□□ -1.4
SKP1P63208 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SKP1P63208 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.3□□□□□ -1.4
SKP1P63208 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SKP1P63208 AC007485.2-201ENST00000623493 1667 ntBASIC6.3□□□□□ -1.4
SKP1P63208 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.29□□□□□ -1.4
SKP1P63208 AC025809.2-201ENST00000625085 1802 ntBASIC6.29□□□□□ -1.4
SKP1P63208 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
SKP1P63208 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
SKP1P63208 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SKP1P63208 AC067942.1-201ENST00000488045 1493 ntBASIC6.29□□□□□ -1.4
SKP1P63208 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SKP1P63208 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 RNA5SP188-201ENST00000362916 129 ntBASIC6.29□□□□□ -1.4
SKP1P63208 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 RNU1-46P-201ENST00000384425 164 ntBASIC6.29□□□□□ -1.4
SKP1P63208 AC245036.1-201ENST00000391727 309 ntBASIC6.29□□□□□ -1.4
SKP1P63208 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.29□□□□□ -1.4
SKP1P63208 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 ARSFP1-201ENST00000398758 477 ntBASIC6.29□□□□□ -1.4
SKP1P63208 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 AC003989.1-201ENST00000434569 565 ntBASIC6.29□□□□□ -1.4
SKP1P63208 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.29□□□□□ -1.4
SKP1P63208 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.29□□□□□ -1.4
SKP1P63208 SULT1D1P-201ENST00000458020 882 ntBASIC6.29□□□□□ -1.4
SKP1P63208 RN7SL83P-201ENST00000468131 297 ntBASIC6.29□□□□□ -1.4
SKP1P63208 RPS3AP49-201ENST00000472161 790 ntBASIC6.29□□□□□ -1.4
SKP1P63208 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.29□□□□□ -1.4
SKP1P63208 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.29□□□□□ -1.4
SKP1P63208 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.29□□□□□ -1.4
SKP1P63208 MRPS5P3-201ENST00000515577 166 ntBASIC6.29□□□□□ -1.4
SKP1P63208 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.29□□□□□ -1.4
SKP1P63208 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.29□□□□□ -1.4
SKP1P63208 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SKP1P63208 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.29□□□□□ -1.4
SKP1P63208 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.29□□□□□ -1.4
SKP1P63208 RN7SL208P-201ENST00000577964 296 ntBASIC6.29□□□□□ -1.4
SKP1P63208 RN7SL66P-201ENST00000582099 264 ntBASIC6.29□□□□□ -1.4
SKP1P63208 SYPL1P2-201ENST00000582878 727 ntBASIC6.29□□□□□ -1.4
SKP1P63208 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.29□□□□□ -1.4
SKP1P63208 AL356986.1-201ENST00000604085 341 ntBASIC6.29□□□□□ -1.4
SKP1P63208 AC018690.1-201ENST00000608144 626 ntBASIC6.29□□□□□ -1.4
SKP1P63208 U1.41-201ENST00000617626 165 ntBASIC6.29□□□□□ -1.4
SKP1P63208 AC027559.1-201ENST00000636288 271 ntBASIC6.29□□□□□ -1.4
SKP1P63208 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SKP1P63208 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SKP1P63208 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.29□□□□□ -1.4
SKP1P63208 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms