Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RPL39P62891 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RPL39P62891 VTRNA3-1P-201ENST00000362552 102 ntBASIC4.48□□□□□ -1.69
RPL39P62891 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.48□□□□□ -1.69
RPL39P62891 SNORA30B-201ENST00000365319 129 ntBASIC4.48□□□□□ -1.69
RPL39P62891 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC4.48□□□□□ -1.69
RPL39P62891 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC4.48□□□□□ -1.69
RPL39P62891 UBBP1-201ENST00000392399 473 ntBASIC4.48□□□□□ -1.69
RPL39P62891 RPL5P20-201ENST00000403848 896 ntBASIC4.48□□□□□ -1.69
RPL39P62891 AL136100.1-201ENST00000407696 330 ntBASIC4.48□□□□□ -1.69
RPL39P62891 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.48□□□□□ -1.69
RPL39P62891 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC4.48□□□□□ -1.69
RPL39P62891 AL359092.1-201ENST00000417156 265 ntBASIC4.48□□□□□ -1.69
RPL39P62891 AL929472.1-201ENST00000417484 429 ntBASIC4.48□□□□□ -1.69
RPL39P62891 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RPL39P62891 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.48□□□□□ -1.69
RPL39P62891 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC4.48□□□□□ -1.69
RPL39P62891 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC4.48□□□□□ -1.69
RPL39P62891 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.48□□□□□ -1.69
RPL39P62891 AC090954.1-201ENST00000445502 361 ntBASIC4.48□□□□□ -1.69
RPL39P62891 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 RPS27AP3-201ENST00000453803 454 ntBASIC4.48□□□□□ -1.69
RPL39P62891 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.48□□□□□ -1.69
RPL39P62891 snoU13.29-201ENST00000459370 104 ntBASIC4.48□□□□□ -1.69
RPL39P62891 RN7SL492P-201ENST00000460700 295 ntBASIC4.48□□□□□ -1.69
RPL39P62891 AC099340.1-201ENST00000475247 599 ntBASIC4.48□□□□□ -1.69
RPL39P62891 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC4.48□□□□□ -1.69
RPL39P62891 RPL5P14-201ENST00000494197 878 ntBASIC4.48□□□□□ -1.69
RPL39P62891 AL390198.2-201ENST00000510553 222 ntBASIC4.48□□□□□ -1.69
RPL39P62891 AC010442.1-201ENST00000515583 816 ntBASIC4.48□□□□□ -1.69
RPL39P62891 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC4.48□□□□□ -1.69
RPL39P62891 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC4.48□□□□□ -1.69
RPL39P62891 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC4.48□□□□□ -1.69
RPL39P62891 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC4.48□□□□□ -1.69
RPL39P62891 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC4.48□□□□□ -1.69
RPL39P62891 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.48□□□□□ -1.69
RPL39P62891 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
RPL39P62891 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC4.48□□□□□ -1.69
RPL39P62891 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 NDUFA3P1-201ENST00000588007 252 ntBASIC4.48□□□□□ -1.69
RPL39P62891 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC4.48□□□□□ -1.69
RPL39P62891 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC4.48□□□□□ -1.69
RPL39P62891 AL592504.1-201ENST00000605319 439 ntBASIC4.48□□□□□ -1.69
RPL39P62891 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC4.48□□□□□ -1.69
RPL39P62891 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 AC004656.1-201ENST00000568479 4951 ntBASIC4.48□□□□□ -1.69
RPL39P62891 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.48□□□□□ -1.69
RPL39P62891 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC4.48□□□□□ -1.69
RPL39P62891 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 ABCA11P-202ENST00000504019 2110 ntBASIC4.48□□□□□ -1.69
RPL39P62891 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPL39P62891 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.47□□□□□ -1.69
RPL39P62891 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
RPL39P62891 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPL39P62891 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPL39P62891 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.47□□□□□ -1.69
RPL39P62891 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPL39P62891 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC4.47□□□□□ -1.69
RPL39P62891 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPL39P62891 AL591135.1-201ENST00000401578 5914 ntBASIC4.47□□□□□ -1.69
RPL39P62891 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPL39P62891 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RPL39P62891 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RPL39P62891 RN7SKP189-201ENST00000365042 330 ntBASIC4.47□□□□□ -1.69
RPL39P62891 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RPL39P62891 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RPL39P62891 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC4.47□□□□□ -1.69
RPL39P62891 RN7SKP137-201ENST00000411074 307 ntBASIC4.47□□□□□ -1.69
RPL39P62891 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC4.47□□□□□ -1.69
RPL39P62891 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC4.47□□□□□ -1.69
RPL39P62891 AC109638.1-201ENST00000417406 326 ntBASIC4.47□□□□□ -1.69
RPL39P62891 AC021876.1-201ENST00000425959 359 ntBASIC4.47□□□□□ -1.69
RPL39P62891 AC092651.1-201ENST00000426110 312 ntBASIC4.47□□□□□ -1.69
RPL39P62891 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.47□□□□□ -1.69
RPL39P62891 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC4.47□□□□□ -1.69
RPL39P62891 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC4.47□□□□□ -1.69
RPL39P62891 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC4.47□□□□□ -1.69
RPL39P62891 RPL7L1P3-201ENST00000455249 689 ntBASIC4.47□□□□□ -1.69
RPL39P62891 SRP68P2-201ENST00000456184 254 ntBASIC4.47□□□□□ -1.69
RPL39P62891 RN7SL145P-201ENST00000469955 296 ntBASIC4.47□□□□□ -1.69
RPL39P62891 AC106800.3-201ENST00000511389 308 ntBASIC4.47□□□□□ -1.69
RPL39P62891 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.47□□□□□ -1.69
RPL39P62891 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.47□□□□□ -1.69
RPL39P62891 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC4.47□□□□□ -1.69
RPL39P62891 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC4.47□□□□□ -1.69
RPL39P62891 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms