Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 AC022336.1-201ENST00000475510 337 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 SETP6-201ENST00000479329 568 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AC016687.1-201ENST00000482574 353 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 HMGB1P38-201ENST00000490557 577 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 RN7SL306P-201ENST00000492941 296 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AC026826.1-201ENST00000493002 361 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 RPS10P20-201ENST00000494130 463 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 RN7SL775P-201ENST00000498361 336 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 AC021106.1-201ENST00000509020 1058 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.31□□□□□ -1.4
CLRN1P58418 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 AC067904.2-201ENST00000517322 1283 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.31□□□□□ -1.4
CLRN1P58418 AC004923.2-201ENST00000529649 369 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.31□□□□□ -1.4
CLRN1P58418 MTCYBP27-201ENST00000555160 670 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 AL031846.1-201ENST00000560933 314 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.31□□□□□ -1.4
CLRN1P58418 AP001357.1-201ENST00000586304 1053 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.31□□□□□ -1.4
CLRN1P58418 DUXAP3-201ENST00000603616 594 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AC104117.5-201ENST00000606195 547 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AC106052.1-201ENST00000608029 497 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.31□□□□□ -1.4
CLRN1P58418 AL669942.2-201ENST00000620352 697 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AL139254.2-202ENST00000641937 1156 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.31□□□□□ -1.4
CLRN1P58418 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.31□□□□□ -1.4
CLRN1P58418 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.31□□□□□ -1.4
CLRN1P58418 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AC110716.2-201ENST00000563865 3945 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 OR5M2P-202ENST00000641241 4242 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.3□□□□□ -1.4
CLRN1P58418 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.3□□□□□ -1.4
CLRN1P58418 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
CLRN1P58418 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 LCOR-201ENST00000286067 4542 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 RN7SKP28-201ENST00000364770 305 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 RNA5SP172-201ENST00000365061 118 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 RNU6-354P-201ENST00000383862 107 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 RNU6-610P-201ENST00000384264 107 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 MIR199B-201ENST00000384849 110 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 RNU6-298P-201ENST00000390888 96 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 FAUP2-201ENST00000394301 401 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 MTCO2P31-201ENST00000402702 684 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AL355615.1-201ENST00000406187 641 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 FTH1P26-201ENST00000406512 701 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 RPSAP44-201ENST00000406712 884 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 MIR1231-201ENST00000408101 92 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.3□□□□□ -1.4
CLRN1P58418 MTCO2P21-201ENST00000419780 677 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.3□□□□□ -1.4
CLRN1P58418 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.3□□□□□ -1.4
CLRN1P58418 RPL12P28-201ENST00000430852 489 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 NIP7P1-201ENST00000433227 512 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC006994.1-201ENST00000438212 839 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.3□□□□□ -1.4
CLRN1P58418 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.3□□□□□ -1.4
CLRN1P58418 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.3□□□□□ -1.4
CLRN1P58418 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.3□□□□□ -1.4
CLRN1P58418 PCMTD1P3-201ENST00000451824 472 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AL122001.1-201ENST00000457027 370 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 SNORD11.1-201ENST00000459482 85 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC008379.1-201ENST00000463655 464 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLRN1P58418 EIF1P7-201ENST00000487533 337 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.3□□□□□ -1.4
CLRN1P58418 AC008427.1-201ENST00000503102 655 ntBASIC6.3□□□□□ -1.4
CLRN1P58418 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms