Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH6P55285 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.77□□□□□ -1.33
CDH6P55285 CASC19-243ENST00000641588 1546 ntBASIC6.77□□□□□ -1.33
CDH6P55285 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDH6P55285 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDH6P55285 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDH6P55285 STAG3L4-201ENST00000352103 530 ntBASIC6.77□□□□□ -1.33
CDH6P55285 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDH6P55285 U3.52-201ENST00000384034 216 ntBASIC6.77□□□□□ -1.33
CDH6P55285 RPL12P23-201ENST00000405880 490 ntBASIC6.77□□□□□ -1.33
CDH6P55285 RN7SKP205-201ENST00000410999 307 ntBASIC6.77□□□□□ -1.33
CDH6P55285 RANP6-201ENST00000413691 644 ntBASIC6.77□□□□□ -1.33
CDH6P55285 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.77□□□□□ -1.33
CDH6P55285 AC003989.1-201ENST00000434569 565 ntBASIC6.77□□□□□ -1.33
CDH6P55285 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDH6P55285 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH6P55285 CCNJP2-201ENST00000457810 1163 ntBASIC6.77□□□□□ -1.33
CDH6P55285 AC022730.1-201ENST00000473114 568 ntBASIC6.77□□□□□ -1.33
CDH6P55285 RPL19P11-201ENST00000495944 589 ntBASIC6.77□□□□□ -1.33
CDH6P55285 AC091965.3-201ENST00000506236 208 ntBASIC6.77□□□□□ -1.33
CDH6P55285 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.77□□□□□ -1.33
CDH6P55285 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.77□□□□□ -1.33
CDH6P55285 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.77□□□□□ -1.33
CDH6P55285 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.77□□□□□ -1.33
CDH6P55285 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.77□□□□□ -1.33
CDH6P55285 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.77□□□□□ -1.33
CDH6P55285 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.77□□□□□ -1.33
CDH6P55285 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.77□□□□□ -1.33
CDH6P55285 AC005519.1-201ENST00000554490 601 ntBASIC6.77□□□□□ -1.33
CDH6P55285 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDH6P55285 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH6P55285 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.77□□□□□ -1.33
CDH6P55285 AC137695.1-201ENST00000604126 489 ntBASIC6.77□□□□□ -1.33
CDH6P55285 U91328.4-201ENST00000608919 517 ntBASIC6.77□□□□□ -1.33
CDH6P55285 U1.41-201ENST00000617626 165 ntBASIC6.77□□□□□ -1.33
CDH6P55285 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDH6P55285 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDH6P55285 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CDH6P55285 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDH6P55285 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDH6P55285 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDH6P55285 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH6P55285 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CDH6P55285 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH6P55285 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH6P55285 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 AL157831.2-201ENST00000564681 3095 ntBASIC6.76□□□□□ -1.33
CDH6P55285 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CDH6P55285 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CDH6P55285 AC010894.1-201ENST00000313760 361 ntBASIC6.76□□□□□ -1.33
CDH6P55285 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 RNU1-5P-201ENST00000362684 144 ntBASIC6.76□□□□□ -1.33
CDH6P55285 AC092634.1-201ENST00000366505 199 ntBASIC6.76□□□□□ -1.33
CDH6P55285 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
CDH6P55285 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH6P55285 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH6P55285 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH6P55285 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CDH6P55285 RPL23AP85-201ENST00000421838 433 ntBASIC6.76□□□□□ -1.33
CDH6P55285 AC097721.1-201ENST00000427150 1253 ntBASIC6.76□□□□□ -1.33
CDH6P55285 VN1R53P-201ENST00000429536 957 ntBASIC6.76□□□□□ -1.33
CDH6P55285 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.76□□□□□ -1.33
CDH6P55285 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.76□□□□□ -1.33
CDH6P55285 NPM1P9-201ENST00000453156 844 ntBASIC6.76□□□□□ -1.33
CDH6P55285 AKR1D1P1-201ENST00000457236 936 ntBASIC6.76□□□□□ -1.33
CDH6P55285 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.76□□□□□ -1.33
CDH6P55285 RPL5P33-201ENST00000487833 905 ntBASIC6.76□□□□□ -1.33
CDH6P55285 AC022206.1-201ENST00000495947 347 ntBASIC6.76□□□□□ -1.33
CDH6P55285 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH6P55285 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.76□□□□□ -1.33
CDH6P55285 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.76□□□□□ -1.33
CDH6P55285 RPL29P33-201ENST00000587474 316 ntBASIC6.76□□□□□ -1.33
CDH6P55285 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.76□□□□□ -1.33
CDH6P55285 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH6P55285 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.76□□□□□ -1.33
CDH6P55285 AC011497.2-201ENST00000600255 639 ntBASIC6.76□□□□□ -1.33
CDH6P55285 AC012065.3-201ENST00000602736 439 ntBASIC6.76□□□□□ -1.33
CDH6P55285 AC091193.1-201ENST00000604640 448 ntBASIC6.76□□□□□ -1.33
CDH6P55285 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.76□□□□□ -1.33
CDH6P55285 MIR6849-201ENST00000618543 69 ntBASIC6.76□□□□□ -1.33
CDH6P55285 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH6P55285 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH6P55285 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH6P55285 MAPK10-270ENST00000641102 3538 ntBASIC6.76□□□□□ -1.33
CDH6P55285 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH6P55285 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDH6P55285 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH6P55285 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH6P55285 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms