Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SNORA70.5-201ENST00000365519 135 ntBASIC5.94□□□□□ -1.46
SOX2P48431 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX2P48431 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX2P48431 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
SOX2P48431 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX2P48431 RNU6-316P-201ENST00000391027 107 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AL589994.1-201ENST00000404962 340 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AMZ2P2-201ENST00000406819 1057 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SOX2P48431 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX2P48431 PRPS1P2-201ENST00000430496 937 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AF274573.1-201ENST00000430535 494 ntBASIC5.94□□□□□ -1.46
SOX2P48431 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 FTLP17-201ENST00000432567 525 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC105052.2-201ENST00000434317 794 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AL645638.1-201ENST00000440519 361 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 LDHBP2-201ENST00000456969 1005 ntBASIC5.94□□□□□ -1.46
SOX2P48431 RN7SL228P-201ENST00000470060 303 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC090589.1-201ENST00000473109 362 ntBASIC5.94□□□□□ -1.46
SOX2P48431 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 SNORA58-201ENST00000505219 137 ntBASIC5.94□□□□□ -1.46
SOX2P48431 NACAP6-201ENST00000509572 622 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC108157.1-201ENST00000510511 539 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX2P48431 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 OR5M4P-201ENST00000529436 925 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.94□□□□□ -1.46
SOX2P48431 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX2P48431 LYZ-202ENST00000548839 558 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 AC074029.2-201ENST00000551045 634 ntBASIC5.94□□□□□ -1.46
SOX2P48431 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC5.94□□□□□ -1.46
SOX2P48431 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX2P48431 AC106785.3-201ENST00000564064 847 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX2P48431 AC093524.1-201ENST00000564266 1094 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC079148.1-201ENST00000565944 819 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC004232.1-201ENST00000571388 208 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC061975.3-201ENST00000583209 244 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC012065.3-201ENST00000602736 439 ntBASIC5.94□□□□□ -1.46
SOX2P48431 ABI1P1-201ENST00000603375 1120 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AL445649.1-201ENST00000615941 691 ntBASIC5.94□□□□□ -1.46
SOX2P48431 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 AP006248.3-201ENST00000623580 594 ntBASIC5.94□□□□□ -1.46
SOX2P48431 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX2P48431 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX2P48431 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SOX2P48431 AL451064.2-201ENST00000623514 1654 ntBASIC5.94□□□□□ -1.46
SOX2P48431 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX2P48431 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX2P48431 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 CASC19-255ENST00000641733 1385 ntBASIC5.93□□□□□ -1.46
SOX2P48431 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SOX2P48431 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 PARP4P1-201ENST00000435945 2337 ntBASIC5.93□□□□□ -1.46
SOX2P48431 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
SOX2P48431 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SOX2P48431 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 RNU4-81P-201ENST00000363561 144 ntBASIC5.93□□□□□ -1.46
SOX2P48431 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 OR7E91P-201ENST00000400027 866 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AL356057.1-202ENST00000402263 756 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AL359715.1-201ENST00000404330 555 ntBASIC5.93□□□□□ -1.46
SOX2P48431 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.93□□□□□ -1.46
SOX2P48431 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC5.93□□□□□ -1.46
SOX2P48431 AL157698.1-201ENST00000415190 1011 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX2P48431 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 AC023141.1-201ENST00000419418 379 ntBASIC5.93□□□□□ -1.46
SOX2P48431 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.93□□□□□ -1.46
SOX2P48431 RPSAP1-201ENST00000421328 880 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC073310.1-201ENST00000423226 1033 ntBASIC5.93□□□□□ -1.46
SOX2P48431 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 AC092066.1-201ENST00000425131 317 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 FECHP1-201ENST00000431896 1214 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 527.9 ms