Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LDHAP5-201ENST00000394996 622 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 RNA5SP251-201ENST00000410614 137 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 ETF1P1-206ENST00000427296 984 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA1P35221 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.92□□□□□ -1.3
CTNNA1P35221 PCMTD1P3-201ENST00000451824 472 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 RPL26P30-201ENST00000453533 435 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA1P35221 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.92□□□□□ -1.3
CTNNA1P35221 RPSAP24-201ENST00000461543 873 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA1P35221 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.92□□□□□ -1.3
CTNNA1P35221 RPS16P9-201ENST00000477220 427 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 NPM1P27-201ENST00000502784 830 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 NPM1P21-201ENST00000513394 762 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA1P35221 RN7SKP248-201ENST00000516278 305 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 AC084337.1-201ENST00000524809 686 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 AC090115.2-201ENST00000548060 883 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA1P35221 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA1P35221 FAM30C-201ENST00000561158 410 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA1P35221 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.92□□□□□ -1.3
CTNNA1P35221 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA1P35221 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.92□□□□□ -1.3
CTNNA1P35221 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.92□□□□□ -1.3
CTNNA1P35221 AC007347.2-201ENST00000623044 180 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA1P35221 AL121936.2-201ENST00000641935 662 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA1P35221 AC068769.1-201ENST00000474767 2426 ntBASIC6.92□□□□□ -1.3
CTNNA1P35221 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.92□□□□□ -1.3
CTNNA1P35221 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA1P35221 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA1P35221 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
CTNNA1P35221 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA1P35221 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.92□□□□□ -1.3
CTNNA1P35221 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA1P35221 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA1P35221 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA1P35221 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA1P35221 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA1P35221 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.91□□□□□ -1.3
CTNNA1P35221 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.91□□□□□ -1.3
CTNNA1P35221 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CTNNA1P35221 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CTNNA1P35221 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CTNNA1P35221 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
CTNNA1P35221 UBBP1-201ENST00000392399 473 ntBASIC6.91□□□□□ -1.3
CTNNA1P35221 AL359694.1-201ENST00000403247 604 ntBASIC6.91□□□□□ -1.3
CTNNA1P35221 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 RN7SKP39-201ENST00000410773 322 ntBASIC6.91□□□□□ -1.3
CTNNA1P35221 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.91□□□□□ -1.3
CTNNA1P35221 RPL23AP18-201ENST00000416139 468 ntBASIC6.91□□□□□ -1.3
CTNNA1P35221 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 AL353803.3-201ENST00000444641 335 ntBASIC6.91□□□□□ -1.3
CTNNA1P35221 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 ST13P21-201ENST00000453250 1098 ntBASIC6.91□□□□□ -1.3
CTNNA1P35221 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.91□□□□□ -1.3
CTNNA1P35221 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.91□□□□□ -1.3
CTNNA1P35221 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 RPL7L1P7-201ENST00000509986 724 ntBASIC6.91□□□□□ -1.3
CTNNA1P35221 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.91□□□□□ -1.3
CTNNA1P35221 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.91□□□□□ -1.3
CTNNA1P35221 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.91□□□□□ -1.3
CTNNA1P35221 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.91□□□□□ -1.3
CTNNA1P35221 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.91□□□□□ -1.3
CTNNA1P35221 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.91□□□□□ -1.3
CTNNA1P35221 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 AP003486.1-201ENST00000525716 3994 ntBASIC6.91□□□□□ -1.3
CTNNA1P35221 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CTNNA1P35221 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
CTNNA1P35221 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CTNNA1P35221 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.91□□□□□ -1.3
CTNNA1P35221 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.91□□□□□ -1.3
CTNNA1P35221 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA1P35221 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.9□□□□□ -1.3
CTNNA1P35221 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTNNA1P35221 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.9□□□□□ -1.3
CTNNA1P35221 HSPD1P8-201ENST00000400121 1658 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTNNA1P35221 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTNNA1P35221 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.9□□□□□ -1.3
CTNNA1P35221 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms