Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
RXRBP28702 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC8.92□□□□□ -0.98
RXRBP28702 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.92□□□□□ -0.98
RXRBP28702 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
RXRBP28702 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8.92□□□□□ -0.98
RXRBP28702 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 RNU6-167P-201ENST00000384292 106 ntBASIC8.92□□□□□ -0.98
RXRBP28702 MIR585-201ENST00000384887 94 ntBASIC8.92□□□□□ -0.98
RXRBP28702 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 RN7SKP293-201ENST00000411389 296 ntBASIC8.92□□□□□ -0.98
RXRBP28702 RPL36P1-201ENST00000419720 225 ntBASIC8.92□□□□□ -0.98
RXRBP28702 AL355433.1-201ENST00000422804 300 ntBASIC8.92□□□□□ -0.98
RXRBP28702 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 MTND2P40-201ENST00000436718 841 ntBASIC8.92□□□□□ -0.98
RXRBP28702 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC8.92□□□□□ -0.98
RXRBP28702 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.92□□□□□ -0.98
RXRBP28702 AC073850.1-201ENST00000449243 255 ntBASIC8.92□□□□□ -0.98
RXRBP28702 RBMY3AP-201ENST00000449381 1145 ntBASIC8.92□□□□□ -0.98
RXRBP28702 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
RXRBP28702 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC8.92□□□□□ -0.98
RXRBP28702 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC8.92□□□□□ -0.98
RXRBP28702 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
RXRBP28702 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC8.92□□□□□ -0.98
RXRBP28702 AC147055.1-201ENST00000509261 750 ntBASIC8.92□□□□□ -0.98
RXRBP28702 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC8.92□□□□□ -0.98
RXRBP28702 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC8.92□□□□□ -0.98
RXRBP28702 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC8.92□□□□□ -0.98
RXRBP28702 PVT1-214ENST00000522875 922 ntTSL 5 BASIC8.92□□□□□ -0.98
RXRBP28702 AC036111.2-201ENST00000533247 901 ntBASIC8.92□□□□□ -0.98
RXRBP28702 AC023538.1-201ENST00000534576 736 ntBASIC8.92□□□□□ -0.98
RXRBP28702 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC8.92□□□□□ -0.98
RXRBP28702 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC8.92□□□□□ -0.98
RXRBP28702 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 AC044860.2-201ENST00000561005 179 ntBASIC8.92□□□□□ -0.98
RXRBP28702 AC092332.1-201ENST00000563684 829 ntBASIC8.92□□□□□ -0.98
RXRBP28702 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC8.92□□□□□ -0.98
RXRBP28702 ELOCP35-201ENST00000604289 336 ntBASIC8.92□□□□□ -0.98
RXRBP28702 RN7SL787P-201ENST00000613000 284 ntBASIC8.92□□□□□ -0.98
RXRBP28702 AC009159.2-201ENST00000617603 606 ntBASIC8.92□□□□□ -0.98
RXRBP28702 AC013437.2-201ENST00000639587 677 ntBASIC8.92□□□□□ -0.98
RXRBP28702 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.92□□□□□ -0.98
RXRBP28702 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC8.92□□□□□ -0.98
RXRBP28702 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 AC006141.1-201ENST00000581917 2170 ntBASIC8.92□□□□□ -0.98
RXRBP28702 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
RXRBP28702 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 AC124045.1-201ENST00000606008 1953 ntBASIC8.92□□□□□ -0.98
RXRBP28702 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.91□□□□□ -0.98
RXRBP28702 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.91□□□□□ -0.98
RXRBP28702 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 AC022150.4-201ENST00000598322 2848 ntBASIC8.91□□□□□ -0.98
RXRBP28702 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.91□□□□□ -0.98
RXRBP28702 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
RXRBP28702 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC8.91□□□□□ -0.98
RXRBP28702 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
RXRBP28702 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.91□□□□□ -0.98
RXRBP28702 SPTLC1P2-201ENST00000407089 121 ntBASIC8.91□□□□□ -0.98
RXRBP28702 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC8.91□□□□□ -0.98
RXRBP28702 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.91□□□□□ -0.98
RXRBP28702 CDY12P-201ENST00000440679 1015 ntBASIC8.91□□□□□ -0.98
RXRBP28702 CDY13P-201ENST00000445813 1015 ntBASIC8.91□□□□□ -0.98
RXRBP28702 RPL36AP39-201ENST00000445859 318 ntBASIC8.91□□□□□ -0.98
RXRBP28702 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.91□□□□□ -0.98
RXRBP28702 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC8.91□□□□□ -0.98
RXRBP28702 ACA64.1-201ENST00000459171 127 ntBASIC8.91□□□□□ -0.98
RXRBP28702 RPL5P16-201ENST00000471467 790 ntBASIC8.91□□□□□ -0.98
RXRBP28702 AC098847.1-201ENST00000473094 348 ntBASIC8.91□□□□□ -0.98
RXRBP28702 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.91□□□□□ -0.98
RXRBP28702 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC8.91□□□□□ -0.98
RXRBP28702 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 PABPC1P1-201ENST00000506347 591 ntBASIC8.91□□□□□ -0.98
RXRBP28702 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC8.91□□□□□ -0.98
RXRBP28702 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.91□□□□□ -0.98
RXRBP28702 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.91□□□□□ -0.98
RXRBP28702 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC8.91□□□□□ -0.98
RXRBP28702 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms