Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL589794.1-201ENST00000424971 390 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
ERCC3P19447 AK3P5-201ENST00000432033 519 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 AL355355.1-201ENST00000442900 793 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 RPS27P5-201ENST00000444247 244 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 RPL21P33-201ENST00000444831 484 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 CEACAMP11-201ENST00000455211 583 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 SRP68P2-201ENST00000456184 254 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 RN7SL251P-201ENST00000464175 297 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 RPS16P9-201ENST00000477220 427 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 RN7SL518P-201ENST00000491887 280 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ERCC3P19447 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ERCC3P19447 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC8.43□□□□□ -1.06
ERCC3P19447 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.43□□□□□ -1.06
ERCC3P19447 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
ERCC3P19447 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 SETP17-201ENST00000534163 817 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 BTG1P1-201ENST00000540396 508 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC8.43□□□□□ -1.06
ERCC3P19447 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC8.43□□□□□ -1.06
ERCC3P19447 AC090971.3-201ENST00000557871 1041 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ERCC3P19447 AC138749.2-201ENST00000566048 167 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 IGLJCOR18-201ENST00000584002 424 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 AC025811.1-201ENST00000604312 472 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 RMST_10.1-201ENST00000616309 154 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
ERCC3P19447 AL132796.3-201ENST00000624703 900 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 AL356585.10-201ENST00000641883 123 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC8.43□□□□□ -1.06
ERCC3P19447 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
ERCC3P19447 MFSD8-256ENST00000641949 1640 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 AC090220.1-201ENST00000593078 1699 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 AC009135.2-201ENST00000624136 1768 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ERCC3P19447 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
ERCC3P19447 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ERCC3P19447 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
ERCC3P19447 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ERCC3P19447 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
ERCC3P19447 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
ERCC3P19447 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
ERCC3P19447 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
ERCC3P19447 RNU6-31P-201ENST00000384388 108 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 HMGB1P10-201ENST00000395823 563 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.42□□□□□ -1.06
ERCC3P19447 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC8.42□□□□□ -1.06
ERCC3P19447 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC8.42□□□□□ -1.06
ERCC3P19447 FDPSP1-201ENST00000424976 1071 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 AL022324.2-201ENST00000434827 780 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 AC092447.2-201ENST00000435487 669 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ERCC3P19447 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.42□□□□□ -1.06
ERCC3P19447 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 OR13C1P-201ENST00000457612 963 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 METTL15P1-201ENST00000481421 1045 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 AC133963.2-201ENST00000513686 578 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC8.42□□□□□ -1.06
ERCC3P19447 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.42□□□□□ -1.06
ERCC3P19447 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC8.42□□□□□ -1.06
ERCC3P19447 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.42□□□□□ -1.06
ERCC3P19447 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
ERCC3P19447 WDR45BP1-201ENST00000583470 1029 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 AC092032.1-201ENST00000603090 165 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 SUMO2P14-201ENST00000604488 293 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 AC025171.4-201ENST00000607250 1047 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.42□□□□□ -1.06
ERCC3P19447 AC027271.1-201ENST00000610270 610 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC8.42□□□□□ -1.06
ERCC3P19447 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
ERCC3P19447 OR7E161P-202ENST00000641994 1033 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.42□□□□□ -1.06
ERCC3P19447 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.42□□□□□ -1.06
ERCC3P19447 CDY5P-201ENST00000411487 1580 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 CDY9P-201ENST00000451397 1580 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ERCC3P19447 AC104162.1-201ENST00000430831 2382 ntBASIC8.42□□□□□ -1.06
ERCC3P19447 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.42□□□□□ -1.06
ERCC3P19447 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
ERCC3P19447 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ERCC3P19447 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
ERCC3P19447 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.42□□□□□ -1.06
ERCC3P19447 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms