Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RARRES2P3-201ENST00000457739 473 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 RPL12P7-201ENST00000493832 494 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 RNA5SP418-201ENST00000515951 117 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 AC026826.3-201ENST00000561747 158 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 AC007066.2-202ENST00000566531 914 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 AC097641.3-201ENST00000613523 464 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 AF117829.2-201ENST00000619538 361 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-DOAP06340 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-DOAP06340 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 RPL31P11-201ENST00000426558 1558 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-DOAP06340 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-DOAP06340 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-DOAP06340 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-DOAP06340 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-DOAP06340 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 MTCO1P8-201ENST00000416914 1523 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 AP002991.2-201ENST00000623807 2801 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 SNORD35A-201ENST00000363389 86 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 MIR188-201ENST00000385034 86 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 RNA5SP198-201ENST00000410376 127 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 AC002127.1-201ENST00000421305 225 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 GAPDHP59-201ENST00000435908 267 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 OR2L9P-201ENST00000444456 913 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 RPL23AP68-201ENST00000480924 445 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 GM2AP2-201ENST00000491764 562 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 LDHAP1-201ENST00000509421 992 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 SMIM12P1-201ENST00000603004 274 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 AL135999.3-201ENST00000610501 812 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 MIR6811-201ENST00000620409 58 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 LINC02495-203ENST00000636704 242 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 AC119674.1-217ENST00000641942 1086 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.74□□□□□ -1.17
HLA-DOAP06340 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
HLA-DOAP06340 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-DOAP06340 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 AC007993.1-201ENST00000621298 2430 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 CASC19-205ENST00000641013 1411 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 YWHAZP6-201ENST00000399764 738 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 RPL21P50-201ENST00000417698 477 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 AC091874.2-201ENST00000505889 720 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 AC008676.3-201ENST00000521237 435 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 BCAS2P1-201ENST00000528022 632 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms