Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AC104162.1-201ENST00000430831 2382 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 OR7A2P-201ENST00000304105 930 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AC017035.1-201ENST00000411999 1115 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 THEM7P-201ENST00000419556 672 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 MTCO3P17-201ENST00000443775 513 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 RPL5P11-201ENST00000498068 893 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 MTCO3P42-201ENST00000509488 518 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 MTCO3P39-201ENST00000514812 518 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AC092375.1-201ENST00000550410 637 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AC037479.1-201ENST00000558361 625 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 AC010333.3-201ENST00000615100 402 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 SNORA16A-202ENST00000628458 135 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC092725.2-201ENST00000567658 1389 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC061975.7-201ENST00000592016 2692 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 RNA5SP321-201ENST00000362722 111 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 RN7SKP171-201ENST00000364417 303 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 MIR621-201ENST00000384919 96 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 MIR640-201ENST00000385086 96 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 RAB5CP1-201ENST00000395972 580 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AL359694.1-201ENST00000403247 604 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AL691447.1-201ENST00000419456 387 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 CRYGGP-201ENST00000443337 145 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 RN7SL413P-201ENST00000482700 297 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 OR51A1P-201ENST00000511110 946 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC121758.1-202ENST00000556917 658 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms