Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX49Q9Y6V7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 AL158211.5-201ENST00000623583 2518 ntBASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
DDX49Q9Y6V7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 AC125437.2-201ENST00000625180 2167 ntBASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.72■■□□□ 1.39
DDX49Q9Y6V7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX49Q9Y6V7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 AC097658.1-201ENST00000475555 843 ntBASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 AL162412.1-201ENST00000567129 965 ntBASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 ITM2C-210ENST00000620962 501 ntBASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 AC011484.1-201ENST00000377652 1995 ntBASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
DDX49Q9Y6V7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 AP000974.1-201ENST00000623909 2387 ntBASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 KRT18P29-201ENST00000397031 1267 ntBASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 AC098590.1-201ENST00000468126 897 ntBASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 RPS2P52-201ENST00000469610 820 ntBASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms