Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 AL671277.2-201ENST00000458060 996 ntBASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 AC130371.2-201ENST00000619443 611 ntBASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 AC116407.4-201ENST00000623319 1061 ntBASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 AC133561.1-201ENST00000568600 2415 ntBASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PTCH2Q9Y6C5 PTBP1P-201ENST00000554374 1601 ntBASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 AP006587.1-201ENST00000534129 1502 ntBASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 CCR12P-201ENST00000446203 998 ntBASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 AL359075.1-203ENST00000462729 1002 ntBASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 AC069148.1-201ENST00000608741 768 ntBASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 AL117328.2-201ENST00000624617 1940 ntBASIC22.49■■□□□ 1.19
PTCH2Q9Y6C5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PTCH2Q9Y6C5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 AC007663.1-201ENST00000438948 1240 ntBASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 MFAP1P1-201ENST00000442257 1255 ntBASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 HOMER2P1-201ENST00000455653 964 ntBASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 AC008040.2-201ENST00000461049 708 ntBASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PTCH2Q9Y6C5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms