Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGA11Q9Y5H2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 AC083906.2-201ENST00000511578 360 ntBASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA11Q9Y5H2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 AC018445.3-201ENST00000624177 1945 ntBASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGA11Q9Y5H2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 BX323043.1-201ENST00000641006 1765 ntBASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA11Q9Y5H2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms